Paraburkholderia kirstenboschensis: RW095_12860
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Entry
RW095_12860 CDS
T09457
Symbol
pcaH
Name
(GenBank) protocatechuate 3,4-dioxygenase subunit beta
KO
K00449
protocatechuate 3,4-dioxygenase, beta subunit [EC:
1.13.11.3
]
Organism
pkf
Paraburkholderia kirstenboschensis
Pathway
pkf00362
Benzoate degradation
pkf00624
Polycyclic aromatic hydrocarbon degradation
pkf01100
Metabolic pathways
pkf01120
Microbial metabolism in diverse environments
pkf01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
pkf00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
RW095_12860 (pcaH)
00624 Polycyclic aromatic hydrocarbon degradation
RW095_12860 (pcaH)
Enzymes [BR:
pkf01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.3 protocatechuate 3,4-dioxygenase
RW095_12860 (pcaH)
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Motif
Pfam:
Dioxygenase_C
PCDO_beta_N
CarboxypepD_reg
Motif
Other DBs
NCBI-ProteinID:
WOD16762
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Position
2:929959..930663
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AA seq
234 aa
AA seq
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MDDSFLSARDFASHPGYIYPGYGSSVKRGPTRPLIPLKEKLRDQRVPVYGTEDLGELDND
LTRNAVRNGEPLGERIIVTGRVLDEGGRPVRNTLVEIWQANAAGRYVHKLDQHDAPLDPN
FLGAGRCITDNGGRYRFLTIKPGAYPWGNHPNAWRPNHIHFSLFGEHFGSRLVTQMYFPG
DPLLAFDPIFQGTPEQARDRLIANFSLDTTQEAYALGYDFDIVLRGRNETPMER
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atggacgattcctttctcagcgcacgtgatttcgcgtcgcatcccggatacatctatccc
ggctacggttcctcggttaaacgcggcccgacacgtccgctgattccgctgaaggagaag
ctccgcgatcagcgcgtgcccgtctatggcaccgaagacctcggcgagctcgacaacgac
ctcacgcgcaacgcggttcgcaacggcgaaccgctcggcgaacgcatcatcgtgacgggg
cgtgtgctcgacgagggtggtcgtccggtgcgcaatacgctcgtggaaatctggcaggcg
aatgcggctggccgctacgtgcataaactggatcagcacgacgcgccgctcgatccgaac
ttcctgggcgcgggtcgctgcatcacggacaacggaggccgctatcgtttcctgacgatc
aagccgggcgcatatccgtggggcaatcatccgaacgcgtggcgtccgaatcacatccac
ttctcgttgtttggcgagcatttcggttcgcgcctcgtcacgcagatgtatttccccggc
gacccgctgctggcgttcgatccgattttccagggcacgcctgagcaagcgcgtgatcgt
ctgattgcgaacttttcgctcgataccacgcaagaggcctacgcgctcggctacgacttc
gacatcgtgctgcgcggccgcaacgaaactccgatggagcgctaa
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