Paraburkholderia kirstenboschensis: RW095_28370
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Entry
RW095_28370 CDS
T09457
Symbol
benD
Name
(GenBank) benzoate diol dehydrogenase BenD
KO
K05783
dihydroxycyclohexadiene carboxylate dehydrogenase [EC:
1.3.1.25
1.3.1.-]
Organism
pkf
Paraburkholderia kirstenboschensis
Pathway
pkf00362
Benzoate degradation
pkf00364
Fluorobenzoate degradation
pkf00622
Xylene degradation
pkf01100
Metabolic pathways
pkf01120
Microbial metabolism in diverse environments
pkf01220
Degradation of aromatic compounds
Module
pkf_M00551
Benzoate degradation, benzoate => catechol / methylbenzoate => methylcatechol
Brite
KEGG Orthology (KO) [BR:
pkf00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
RW095_28370 (benD)
00364 Fluorobenzoate degradation
RW095_28370 (benD)
00622 Xylene degradation
RW095_28370 (benD)
Enzymes [BR:
pkf01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.1 With NAD+ or NADP+ as acceptor
1.3.1.25 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase
RW095_28370 (benD)
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Motif
Pfam:
adh_short
adh_short_C2
3HCDH_N
Epimerase
Motif
Other DBs
NCBI-ProteinID:
WOD20115
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Position
1:1272982..1273758
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AA seq
258 aa
AA seq
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MNAQRFEGKVMVVTGAAQGIGRGVALRAASEGAKVLLVDRAEFVSDVAAEAIGAQTAGFV
ADLETYEGAASTMAFAAQKFGRIDILVNAVGGAIRMRPFAEFEPAQIDAEIRRSLMPTLY
ACHAVLPQMLTQGRGTIVNVSSNATRGIRRVPYSAAKGGVNALTQSLAMEYGERNIRVVA
AAPGGTEAPPRRVPRNAAGDNDQERAWMSEAVKQVAESNFFKRYGTLEEQVAPILFLASD
EAGYITGAVLPVAGGDNG
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgcaaaggttcgaaggcaaggtgatggtagtcacgggagcggcgcagggaatc
gggcgcggcgtcgccctgcgtgcagcatcggagggtgcgaaagtgctgttggtggaccgc
gccgagtttgtctccgatgtcgccgccgaggcgattggtgcccagacagccggcttcgtc
gcagacctcgagacgtatgaaggtgcagcttcgacaatggctttcgcggcgcaaaagttt
ggccggatcgacattctcgtcaatgcggtgggcggtgcgattcgcatgcggcctttcgcg
gaattcgaaccggcccagatcgatgctgaaatccgccgttccctgatgccgaccctgtat
gcgtgccacgcggtcctccctcagatgctgacgcaaggccggggaaccattgtcaacgtc
tcatcgaatgccacacgaggtattcgccgcgtgccctactcggctgccaagggcggcgtc
aatgcgctaacccagtcgctcgcgatggagtacggcgaacgcaacatccgcgtggtcgct
gctgctccgggcgggacagaggcgcctccgcgacgcgtgcctcgcaacgcagccggagat
aacgaccaggaaagggcctggatgagcgaagccgtgaagcaggtggctgagtccaacttc
ttcaagcgctatgggacgcttgaagagcaagtcgcgccgattctctttcttgcatccgac
gaagctggctacatcacgggtgccgtgttgccggttgccggcggcgacaacggctag
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