Pseudomonas kielensis: Q1W70_04540
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Entry
Q1W70_04540 CDS
T09328
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pkj
Pseudomonas kielensis
Brite
KEGG Orthology (KO) [BR:
pkj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pkj03009
]
Q1W70_04540 (rimO)
Enzymes [BR:
pkj01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
Q1W70_04540 (rimO)
Ribosome biogenesis [BR:
pkj03009
]
Prokaryotic type
ribosomal protein modification factors
Q1W70_04540 (rimO)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
WKL53849
LinkDB
All DBs
Position
901273..902610
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AA seq
445 aa
AA seq
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MSTTPASANPKVGFVSLGCPKALVDSERILTQLRMEGYDVVSTYQDADVVVVNTCGFIDS
AKAESLEVIGEAIKENGKVIVTGCMGVEEGNIRNVHPSVLAVTGPQQYEQVVNAVHEVVP
PRQDHNPLIDLVPPQGIKLTPRHYAYLKISEGCNHSCSFCIIPSMRGKLVSRPVGDVLDE
AQRLVKSGVKELLVISQDTSAYGVDVKYRTGFWNGAPVKTRMTELCEALSTLGVWVRLHY
VYPYPHVDELIPLMAAGKILPYLDIPFQHASPKVLKSMKRPAFEDKTLARIKNWREICPD
LIIRSTFIVGFPGETEEDFQYLLNWLTDAQLDRVGCFQYSPVEGAPANDLDLDVVPDDVK
QDRWERFMAHQQAISSARLQMRIGREIEVLVDEVDEQGAVGRCFFDAPEIDGNVFIDNGS
NLKPGDKVWCKVTDADEYDLWAEQI
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccactcctgcgtcggccaaccccaaggttggcttcgtatccctgggttgccca
aaagcgttggtcgactccgaacgcatccttacccaactgcgtatggaaggctatgacgtc
gtgtccacctatcaggacgcggacgtcgtggtggtgaacacctgtggcttcatcgactcg
gccaaggccgaatccctggaagtgatcggcgaagccatcaaggaaaacggcaaggtcatc
gtgaccggctgcatgggcgtcgaagaaggcaacatccgcaacgtgcacccaagcgtgctg
gccgtcaccggcccgcagcagtacgagcaagtggtcaatgccgtgcacgaagtcgtgccg
ccgcgccaggatcacaacccgctgatcgacctggtgccgccacaaggcatcaagttgacc
ccgcgtcactacgcctacctgaagatttccgaaggctgcaaccacagctgcagcttctgc
atcatcccgtcgatgcgcggcaagctggtcagccgcccggtgggcgacgtgctggacgag
gcccagcgcctggtcaaatccggcgtcaaggaactgctggtgatctcccaggacaccagc
gcctacggcgttgacgtcaagtaccgcaccgggttctggaatggcgcgccggtgaagacc
cgcatgaccgaactctgcgaagccctcagcaccctgggtgtctgggtgcgcctgcactac
gtttacccgtacccacacgtcgacgagctgatcccgctgatggccgctggcaagatcctg
ccgtacctggacatcccgttccagcacgccagcccgaaagtcctcaagtcgatgaaacgc
ccggccttcgaagacaagaccctggcgcgcatcaagaactggcgcgaaatctgcccggac
ctgatcatccgttcgaccttcatcgtcggcttccccggcgaaaccgaagaagacttccag
tacctgctgaactggctgaccgacgcccaactcgaccgcgtgggctgcttccagtactcg
ccggtagaaggcgcaccggccaacgacctggacctggacgtggtcccggacgacgtcaag
caggaccgttgggagcgcttcatggcgcaccagcaggccatcagttcggcgcgcctgcaa
atgcgcatcggccgtgaaatcgaagtgctggtcgatgaagtcgacgagcaaggcgcggtc
ggccgctgcttcttcgatgccccggaaatcgacggcaacgtattcatcgacaacggcagc
aacctcaagcccggcgataaagtctggtgcaaggtcaccgatgccgacgagtacgacctg
tgggctgaacagatctaa
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