Pseudomonas kurunegalensis: QQ992_05985
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Entry
QQ992_05985 CDS
T09327
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
pkk
Pseudomonas kurunegalensis
Pathway
pkk00300
Lysine biosynthesis
pkk01100
Metabolic pathways
pkk01120
Microbial metabolism in diverse environments
pkk01230
Biosynthesis of amino acids
Module
pkk_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pkk00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
QQ992_05985 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pkk01002
]
QQ992_05985 (dapE)
Enzymes [BR:
pkk01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
QQ992_05985 (dapE)
Peptidases and inhibitors [BR:
pkk01002
]
Metallo peptidases
Family M20
QQ992_05985 (dapE)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
BNR_2
Glyco_transf_20
Motif
Other DBs
NCBI-ProteinID:
WJD63847
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Position
complement(1334092..1335243)
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AA seq
383 aa
AA seq
DB search
MTAPAELSPTLQLACDLIRRPSVTPVDADCQAQMMNRLGAVGFQLEPMRIEDVDNFWAAH
GTQEGPVLCFAGHTDVVPTGPVQQWQHEPFEALIDADGMLCGRGAADMKGSLASMVIASE
RFVHDYPNHRGKVAFLITSDEEGPAHHGTKAVVERLKARNERLDWCIVGEPSSTTLLGDV
VKNGRRGSLGAKLTVRGKQGHVAYPHLARNPIHLAAPALAELAAEHWDEGNAFFPPTSFQ
ISNLNSGTGATNVVPGELTALFNFRFSTESTVEGLQARVSAILDKHELDWSIDWALSGLP
FLTEPGELLDAVAASIKGVTGRDTQPSTSGGTSDGRFIATMGTQVVELGPVNATIHQVDE
RILASDLDLLTEIYYQTLVRLLA
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgacggcccctgccgagctctcgcctacccttcaactggcctgcgacctgatccgtcgc
ccctcggtcacccccgtcgacgccgattgccaggcgcagatgatgaaccgcctgggcgcc
gtgggcttccagctggagccgatgcgcattgaagacgtcgacaatttctgggccgcccat
ggcacccaggagggcccggtgctgtgctttgccggccacaccgacgtggtgcccaccggc
ccggtgcagcaatggcagcatgaaccgttcgaagcactgatcgacgccgacggcatgctc
tgcggccgtggcgctgccgacatgaagggcagcctggcctccatggtgatcgccagcgag
cgcttcgtgcacgactacccgaaccaccgtggcaaggtcgccttcctgatcaccagcgac
gaggaaggcccggctcaccacggcaccaaggcggtggtcgaacgcctgaaagcgcgcaac
gaacgcctggactggtgcatcgtcggcgaaccctccagcaccaccctgctgggtgacgtg
gtcaagaacggccgtcgcggttcgctgggtgccaaactgaccgtgcgcggcaagcaaggc
cacgtggcctacccgcacctggcgcgcaacccgatccacctggccgccccggccctggcg
gaactggcagccgagcactgggacgaaggcaacgcgttcttcccgccgaccagcttccag
atctccaacctcaattccggcaccggcgccaccaacgtggtcccgggcgagctgactgcc
ctgttcaacttccgcttctctaccgagtccaccgtcgaaggcctgcaggcgcgcgtctcg
gcgattctcgacaagcatgaactggactggtcgatcgactgggcgctgtctggcctgcca
ttcctcaccgaaccgggcgaactgctggacgctgtggcggccagcatcaagggcgtcacc
ggccgcgacacccagccgtccaccagcggcggtacctccgatggccgcttcatcgccacc
atgggtacgcaggtggtcgagctgggcccggtcaacgccaccattcaccaggtggacgag
cggattctggccagcgacctcgacctgctgaccgaaatctactaccagaccctggtccgg
ttgctcgcctga
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