Pseudomonas kurunegalensis: QQ992_12940
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Entry
QQ992_12940 CDS
T09327
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
pkk
Pseudomonas kurunegalensis
Pathway
pkk00540
Lipopolysaccharide biosynthesis
pkk01100
Metabolic pathways
pkk01250
Biosynthesis of nucleotide sugars
Module
pkk_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
pkk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
QQ992_12940 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pkk01005
]
QQ992_12940 (rfaD)
Enzymes [BR:
pkk01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
QQ992_12940 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
pkk01005
]
Core region
QQ992_12940 (rfaD)
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
Polysacc_synt_2
DapB_N
Motif
Other DBs
NCBI-ProteinID:
WJD65169
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Position
2906322..2907353
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AA seq
343 aa
AA seq
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MTIIVTGAAGFIGSNLVQALNRRNETEIIAVDDLTDGDKFRNLADSEIADYLDKDDFLDR
FARGQFGKVRAVLHQGACSSTVEADGRFMMDNNYRYSHELLVSAQRQQTPFLYASSAAVY
GAGRDFREQRECERPLNVYGYSKFLFDQQVRRQLTAARSQIVGLRYFNVYGPQEQHKGAM
ASVALHCFNQYQALGKVTLFGRYGDYPSGGHLRDFVSVDDVVKVNMFFLDHPQSSGIFNV
GSGRAQPFNDVALAVINRLREQQDQPPLSLETALLEGVLEYCEFPDHLRGKYQCFTCADL
ERLRAAGYKAQTLTVQQGVARYCDWLLGVQSPPPAPFKQAAEA
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgacgatcatcgtaaccggcgctgctggcttcatcggcagcaacctcgttcaggcactt
aaccgacgtaacgaaacggagattatcgccgtcgacgacctgaccgatggcgacaaattc
cgcaacctggccgacagtgaaatcgctgattacctggacaaggacgattttctcgatcgt
tttgctcggggccagtttggtaaggttcgcgccgtgctgcaccaaggcgcgtgttcaagc
acagtcgaagccgatggtcgtttcatgatggacaacaactaccggtacagccacgaattg
cttgtatctgcgcagcgccagcaaacgccgttcttgtatgcgtcatcggcagctgtgtac
ggtgcaggacgagattttcgcgaacagcgcgaatgcgagcgaccgctgaacgtttatggc
tattccaaattcctgttcgatcaacaggtgcgccgacagttgactgcagcacgcagccag
atcgttggtttgcgttatttcaacgtgtacggcccccaagaacagcataaaggcgccatg
gcgtcagtggccctgcactgcttcaaccagtaccaggccctaggaaaagtgacgctgttt
ggccgttatggtgattatcccagcggtggtcacctgcgtgatttcgtctctgtagatgat
gtggtcaaggtcaacatgttcttccttgatcacccgcaatcaagcggcattttcaatgta
ggcagcggtcgcgcccagcctttcaatgacgttgcgttggctgtaatcaatcggctacgt
gagcaacaagaccaacccccgttgtcacttgagacggccttgctcgaaggtgtactggag
tactgcgagtttccggatcatttgcgtggcaaataccagtgttttacctgtgccgacctc
gagcgcttacgcgctgccgggtacaaggcacaaacgttgacagtccagcaaggcgtggcc
cgctactgcgactggttgttgggtgtccagagcccgccgcctgctccattcaagcaagcg
gcggaagcttag
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