Pipistrellus kuhlii (Kuhl's pipistrelle): 118727025
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Entry
118727025 CDS
T07682
Symbol
POLR2A
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
pkl
Pipistrellus kuhlii (Kuhl's pipistrelle)
Pathway
pkl03020
RNA polymerase
pkl03420
Nucleotide excision repair
pkl05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
pkl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
118727025 (POLR2A)
09124 Replication and repair
03420 Nucleotide excision repair
118727025 (POLR2A)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
118727025 (POLR2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pkl03021
]
118727025 (POLR2A)
03400 DNA repair and recombination proteins [BR:
pkl03400
]
118727025 (POLR2A)
Enzymes [BR:
pkl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
118727025 (POLR2A)
Transcription machinery [BR:
pkl03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
118727025 (POLR2A)
DNA repair and recombination proteins [BR:
pkl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
118727025 (POLR2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_3
RNA_pol_Rpb1_7
RNA_pol_Rpb1_R
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
118727025
NCBI-ProteinID:
XP_036308369
LinkDB
All DBs
Position
Unknown
AA seq
1970 aa
AA seq
DB search
MHGGGPPSGDSACPLRTIKRVQFGVLSPDELKRMSVTEGGIKYPETTEGGRPKLGGLMDP
RQGVIERTGRCQTCAGNMTECPGHFGHIELAKPVFHVGFLVKTMKVLRCVCFFCSKLLVD
SNNPKIKDILAKSKGQPKKRLTHVYDLCKGKNICEGGEEMDNKFGVEQPEGDEDLTKEKG
HGGCGRYQPRIRRSGLELYAEWKHVNEDSQEKKILLSPERVHEIFKRISDEECFVLGMEP
RYARPEWMIVTVLPVPPLSVRPAVVMQGSARNQDDLTHKLADIVKINNQLRRNEQNGAAA
HVIAEDVKLLQFHVATMVDNELPGLPRAMQKSGRPLKSLKQRLKGKEGRVRGNLMGKRVD
FSARTVITPDPNLSIDQVGVPRSIAANMTFAEIVTPFNIDRLQELVRRGNSQYPGAKYII
RDNGDRIDLRFHPKPSDLHLQTGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWS
TFRLNLSVTTPYNADFDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQD
TLTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHI
NCIRTHSTHPDDEDSGPYKHISPGDTKVVVENGELIMGILCKKSLGTSAGSLVHISYLEM
GHDITRLFYSNIQTVINNWLLIEGHTIGIGDSIADSKTYQDIQNTIKKAKQDVIEVIEKA
HNNELEPTPGNTLRQTFENQVNRILNDARDKTGSSAQKSLSEYNNFKSMVVSGAKGSKIN
ISQVIAVVGQQNVEGKRIPFGFKHRTLPHFIKDDYGPESRGFVENSYLAGLTPTEFFFHA
MGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGEDGLAGES
VEFQNLATLKPSNKAFEKKFRFDYTNERALRRTLQEDLVKDVLSNAHIQNELEREFERMR
EDREVLRVIFPTGDSKVVLPCNLLRMIWNAQKIFHINPRLPSDLHPIKVVEGVKELSKKL
VIVNGDDPLSRQAQENATLLFNIHLRSTLCSRRMAEEFRLSGEAFDWLLGEIESKFNQAI
AHPGEMVGALAAQSLGEPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLT
VFLLGQSARDAERAKDILCRLEHTTLRKVTANTAIYYDPNPQSTVVAEDQEWVNVYYEMP
DFDVARISPWLLRVELDRKHMTDRKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIR
IMNSDENKMQEEEEVVDKMDDDVFLRCIESNMLTDMTLQGIEQISKVYMHLPQTDNKKKI
IITEDGEFKALQEWILETDGVSLMRVLSEKDVDPVRTTSNDIVEIFTVLGIEAVRKALER
ELYHVISFDGSYVNYRHLALLCDTMTCRGHLMAITRHGVNRQDTGPLMKCSFEETVDVLM
EAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLLDAEKCKYGMEIPTNIPGLGAAGPTG
MFFGSAPSPMGGISPAMTPWNQGATPAYGAWSPSVGSGMTPGAAGFSPSAASDASGFSPG
YSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSP
SYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP
TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS
YSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPT
SPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKY
SPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTS
PKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDDSDEEN
NT seq
5913 nt
NT seq
+upstream
nt +downstream
nt
atgcacgggggcggccccccctccggggacagcgcatgcccgctgcgcaccatcaagagg
gtgcagttcggagtcctcagcccggacgagctgaagcggatgtctgtgacggagggtggt
atcaagtacccggagaccacggagggaggccgccccaagcttggggggcttatggatccg
aggcaaggggtgatcgagcgaactggccgctgccaaacatgtgcaggaaacatgacggag
tgccctggccacttcggccacattgagctggccaagcccgtgttccacgtgggcttcctg
gtgaagacgatgaaggttctgcgctgtgtctgcttcttctgctccaagctgctcgtggac
tccaacaacccaaagatcaaggacatcttggcgaagtctaaggggcagcccaagaagcgg
ctcacgcacgtctacgacctctgcaagggcaagaacatctgcgagggcggcgaggagatg
gacaacaagtttggtgtggagcagcccgaaggggacgaggatttgaccaaagaaaagggc
cacggtggctgtgggcggtaccagccccggatccggcgctcgggcctggagctgtatgcg
gagtggaagcatgtcaatgaggactcccaggagaagaagatcctgctgagtcctgagcga
gtgcatgagatcttcaagcgcatctccgacgaggagtgcttcgtgctgggcatggagccg
cgctacgcccggcccgagtggatgatcgtcacggtgctgccggtgccgccgctgtccgtg
cggcccgccgtggtgatgcagggctccgcccgcaaccaggatgacctgacccacaagctg
gccgacatcgtgaagatcaacaatcagcttcggcgcaacgagcagaacggcgcggcggcc
cacgtcatcgcggaggacgtgaagctcctccagttccacgtggccaccatggtggacaac
gagctgcctggcttgcctcgcgccatgcaaaagtccgggcgtcccctcaagtccctgaag
cagcggctgaagggcaaggaaggccgggtgcgaggaaacctgatgggcaagcgagtggac
ttctcagcccgcacggtcatcacccccgaccccaacctctccatcgaccaggttggcgtg
cctcgctccattgccgccaacatgacctttgcagagattgtcacccccttcaacatcgac
agacttcaggaactagtgcgcagggggaacagccagtacccaggggccaagtacatcatc
cgggacaatggggaccgcatcgacctgcgtttccaccccaagcccagtgaccttcacctg
cagactggctataaggtggaacggcacatgtgcgatggggacattgtcatcttcaaccgg
cagccaactttgcataaaatgtccatgatgggccaccgggtccgcatcctcccctggtct
actttccgcttgaacctgagtgtgaccaccccgtacaacgctgacttcgacggggacgag
atgaacttgcacctcccacagtctctcgagacgcgggccgagatccaggagctcgccatg
gtgccgcgcatgatcgtcacgccccagagcaaccgccccgtcatgggcatcgtgcaggac
acgctcaccgccgtgcgcaagttcaccaagagggacgtcttcctggagcggggagaagtg
atgaacctcctcatgttcctgtccacgtgggacgggaaggtgccgcagccggccatcctg
aagccccggcccctgtggaccggcaagcagatcttctccctcatcatccccggccacatc
aactgcatccgcacccacagcacccaccccgacgacgaagacagcggcccctacaagcac
atctccccgggcgacaccaaggtggtggtggagaatggggagctgatcatgggcatcctg
tgtaagaagtccttgggcacgtccgctggctcgctggtgcacatctcttacctggagatg
ggccatgacatcactcgcctcttctactccaacattcagaccgtcatcaacaactggctc
ctcatcgagggtcataccattggcatcggggactccattgctgattccaagacttaccag
gacattcagaacactattaagaaggccaagcaggatgtgatagaggtcatcgagaaggcg
cataacaacgagctggagcccacccccgggaacaccctgcggcagacgtttgagaaccag
gtgaaccgcattctcaacgacgcccgcgacaagactggctcctctgcccagaagtccctg
tctgagtacaacaacttcaagtccatggttgtgtccggagctaaaggttccaagatcaac
atctcccaggtcattgctgtcgtcgggcagcagaacgtggagggcaagcggatcccattc
ggattcaagcaccggactctgcctcacttcatcaaggatgactacgggcctgagagccgt
ggctttgtagagaactcctacctggccggcctcacacccaccgagttcttcttccacgcc
atgggggggcgtgaggggctcatcgacacggccgtcaagactgcggagactggatacatc
cagcggcggctgatcaagtctatggagtcggtgatggtgaagtacgacgccaccgtgcgc
aactccatcaaccaggtggtgcagctgcgctacggcgaggacggcctggcgggcgagagc
gtggagttccagaacctggctaccctcaagccttccaacaaggcttttgagaagaagttc
cgctttgactataccaacgagagggccctgcggcgcactctgcaggaggacctggtgaag
gacgtgctgagcaacgcgcacatccagaacgagctggagcgggagtttgaaaggatgcgt
gaggaccgggaggtgctcagggtcatcttcccaaccggggacagcaaggttgtcctcccc
tgtaacctgctgcgcatgatctggaacgctcagaaaatcttccatatcaaccctcgcctc
ccctcggacctgcaccccatcaaggtggtggagggagtcaaagaactgagcaagaagctg
gtgattgtgaacggggacgacccgctgagccggcaggcccaggagaacgccacgctgctc
ttcaacatccaccttcgctccacgctgtgctcccgccgcatggcggaggagttccggctc
agcggagaggccttcgactggctgctcggagagatcgagtccaagttcaaccaagccatt
gcccatcctggggagatggtgggagcgctggctgcacagtcccttggagagcctgcaacc
cagatgactctgaacacctttcactatgcgggtgtgtccgccaagaacgtgaccctgggc
gtgccccggctcaaggagctcatcaacatttccaagaagccgaagacgccctcactcacc
gtcttcctgctgggccagtctgcacgcgacgccgagagagccaaggacatcctgtgccgt
ctggaacatacaacgctgaggaaggtgacagccaacacagctatctactatgaccccaac
ccccagagcacggtggtggcagaggatcaggagtgggtgaacgtctactatgagatgccc
gacttcgatgtggcccgaatctccccctggcttttgcgggtggagctggaccgcaagcac
atgactgaccggaagctgaccatggagcagattgctgagaagatcaatgctggttttggc
gatgacttgaattgcatctttaacgatgacaatgcagagaagctggtcctccggatccgc
atcatgaacagtgatgaaaacaagatgcaggaggaggaagaggtggtggacaagatggac
gatgatgtttttctgcgctgcattgagtccaacatgctgacggatatgaccctgcagggt
atcgagcagatcagcaaggtgtacatgcacctgccacagacagacaacaagaagaagatc
atcatcacggaggacggggagttcaaggccctgcaggagtggatcctggagacggacggt
gtgagcctgatgcgggtgctgagcgagaaggacgtggaccccgtgcgcaccacgtccaac
gacatcgtggagatcttcacggtgttgggcattgaagccgtgcggaaggcgctggagcgg
gagctgtaccacgtcatctcctttgacggctcctacgtcaactaccggcatttggcgctc
ctgtgtgacaccatgacctgtcgtggccacttgatggccatcacgcgacacggagtcaac
cgccaagacactggcccgctcatgaagtgctccttcgaggaaacggtggatgtgctcatg
gaagcggctgcgcatggagagagcgaccccatgaagggggtgtctgagaacatcatgctg
ggccagctggctcctgctggcaccggctgcttcgacctcctcctcgatgccgagaagtgc
aagtacggcatggagatccccaccaacatccccggcctgggcgctgccggacccaccggc
atgttcttcggctccgcacccagccccatgggaggaatttctccagccatgacgccctgg
aaccagggggcgaccccagcctacggcgcctggtcgcccagtgtggggagcggaatgact
ccaggggcagccggcttctcccccagtgctgcctccgatgccagcggcttcagccccggc
tactcccccgcctggtcgcccacacctggctccccgggatcccctggcccctcaagcccg
tacatcccgtcaccaggcggtgccatgtctcccagctactcaccaacgtcgcctgcctac
gagccccgctcccctgggggctacacaccccagagtccctcgtactctcccacctcaccc
tcctactcccctacctccccgtcctattctccaaccagccccaactacagtcccacatca
cccagctactccccgacctctcccagctactccccgacttctcccagctactccccgacc
tctcccagctactctcccacctctcccagctactcgccaacttccccaagctactcgcca
acatcacctagctactcgccaacctctcccagctactcgccaacctctcccagctactca
ccaacttctcccagctactcgccaacatcacccagctattctcccacctctcccagctac
tcgccgacttctccaagttattctccgacatcaccgagttactcacccacttccccaagt
tattcacccaccagccctaactactctccaaccagtcccaattacaccccgacatcaccc
agctacagcccaacttctcccagctactcgcctactagtcccaactacacaccaacaagc
cctaactacagcccaacctctccaagctactctccgacttcacccagctactccccgacc
tcgccaagctactccccttcaagtccacggtacacaccacagtctccaacttacaccccg
agctcgcccagctacagtcccagttctcccagctacagccctacctcaccgaagtacacc
ccgaccagcccttcctacagtcccagctcaccagagtacaccccaacctcccccaagtac
tcgcctaccagcccgaagtactcgcctacctcccccaagtactctccgaccagccccacc
tattcgcccaccaccccaaaatactcacccacctctcccacctactccccaacctctcca
gtctacaccccgacctcccccaagtactcgcctactagccccacctactcccccacctcc
cccaagtactcgcccaccagccccacctactcgcccacctcccccaaaggctccacctac
tcgcccacttcccccggctactcacccaccagccccacctatagtctcaccagcccggcc
atcagcccagatgacagcgacgaggagaactga
DBGET
integrated database retrieval system
