Pseudomonas kermanshahensis: PZ739_08225
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Entry
PZ739_08225 CDS
T08964
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pkm
Pseudomonas kermanshahensis
Pathway
pkm00071
Fatty acid degradation
pkm00280
Valine, leucine and isoleucine degradation
pkm00310
Lysine degradation
pkm00362
Benzoate degradation
pkm00380
Tryptophan metabolism
pkm00410
beta-Alanine metabolism
pkm00640
Propanoate metabolism
pkm00650
Butanoate metabolism
pkm00907
Pinene, camphor and geraniol degradation
pkm00930
Caprolactam degradation
pkm01100
Metabolic pathways
pkm01110
Biosynthesis of secondary metabolites
pkm01120
Microbial metabolism in diverse environments
pkm01200
Carbon metabolism
pkm01212
Fatty acid metabolism
Module
pkm_M00087
beta-Oxidation
pkm_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pkm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
PZ739_08225 (fadB)
00650 Butanoate metabolism
PZ739_08225 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
PZ739_08225 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
PZ739_08225 (fadB)
00310 Lysine degradation
PZ739_08225 (fadB)
00380 Tryptophan metabolism
PZ739_08225 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
PZ739_08225 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
PZ739_08225 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
PZ739_08225 (fadB)
00930 Caprolactam degradation
PZ739_08225 (fadB)
Enzymes [BR:
pkm01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
PZ739_08225 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
PZ739_08225 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
PZ739_08225 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
PZ739_08225 (fadB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
SDH_sah
Motif
Other DBs
NCBI-ProteinID:
WEL57134
LinkDB
All DBs
Position
1807019..1809166
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELKFDLKGESVNKFNRLTLNELREAVDAIKADASVKGVIVSS
GKDVFIVGADITEFVDNFKLPEAELVAGSLEANRIFNAFEDLEVPTVAAINGIALGGGLE
MCLAADYRVMASTAKIGLPEVKLGIYPGFGGTVRLPRLIGSDNAVEWIAAGKENRAEDAL
KVGAVDAVVAPELLQAGALDLIKRAISGELDYKAKRQPKLEKLKLNAIEQMMAFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEIEAAGFAKLAKTSVAQSLIGLFLNDQEL
KRKAKAHDEIARDVKQAAVLGAGIMGGGIAYQSAVKGTPILMKDIREDAIQLGLNEASKL
LGNRVEKGRLTPAKMAEALNAIRPTLSYGDFAHVDIVVEAVVENPKVKQAVLAEVEGQVK
EDAILASNTSTISINLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSEVAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKVMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDERRSAVDALYEANRLGQKNGKGFYAYETDKRGKP
KKVFDPAVLDVLKTIVFEQREVTDEDIINWMMVPLCLETVRCLEDGIVETAAEADMGLVY
GIGFPPFRGGALRYIDAIGVAEFVALADQYADLGPLYHPTAKLREMAKNGQRFFN
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgaaagtggcatcgtcgaactc
aagttcgatctcaagggtgagtccgtcaacaaattcaatcgcctgaccctgaacgagctt
cgcgaagcggtcgatgccatcaaggccgacgcttcggtcaagggcgtaatcgtcagcagc
ggcaaggacgtgttcatcgtcggcgccgacatcaccgagttcgtcgacaacttcaagctg
cccgaggccgagctggtagccggcagcctggaagccaaccgcatcttcaatgccttcgaa
gacctcgaagtgccgaccgttgccgccatcaatggcatcgccctgggcggtggcctggaa
atgtgcctggcggccgattaccgggtcatggccagcactgccaagattggcctgcctgaa
gtcaaactgggcatctacccaggcttcggcggtaccgtgcgcctgccgcgactgatcggt
tcggacaacgcggtcgagtggattgccgccggcaaggaaaaccgtgccgaagacgccctc
aaggtcggtgccgtcgacgccgtggtcgcccctgagttgctgcaagccggtgccctggac
ctgatcaagcgcgccatcagcggcgagctggactacaaggccaagcgccagccgaaactg
gaaaagctcaagctcaatgccatcgagcagatgatggcgttcgagacggccaaaggcttt
gtcgcaggccaggctgggccgaactacccagcgccggtcgaagccatcaagaccattcag
aaggccgccaacttcggccgtgacaaggccctggaaatcgaagccgcaggctttgccaag
ctggccaagacgtcggttgcccagagcctgatcggcctgttcctgaacgatcaggagctc
aagcgcaaggccaaggcccatgacgagatcgcccgtgacgtgaagcaggctgccgtgctc
ggcgctggcatcatgggtggcggcatcgcctaccagtcggcggtcaagggcacgccgatc
ctgatgaaggacatccgcgaagacgccattcagctgggccttaacgaagcctctaagctg
ctgggcaatcgcgttgaaaaaggccgcctgacccccgccaagatggctgaagcactcaac
gccatccgcccgaccctgtcctacggcgatttcgcccacgtcgacatcgtcgtcgaggcc
gtggtcgagaacccgaaggtcaagcaagccgtgttggcagaagtcgaaggccaggtgaaa
gaggatgccatcctcgcctccaacacctcgaccatctccatcaacctgctggccaaagcg
ctcaagcgcccagaaaacttcgtcggcatgcacttcttcaacccggtgcacatgatgccg
ctggtcgaagtcattcgcggcgagaagtccagtgaagtggcggttgccaccaccgtggcg
tatgccaagaaaatgggcaagaacccaatcgtggtcaacgactgcccgggcttcctggtc
aaccgcgtgctgttcccgtacttcggcggtttcgccaagctggtcagcgctggcgtcgac
ttcgtgcgcatcgacaaggtcatggagaagttcggctggcccatgggccctgcctacctg
atggacgtggtcggcatcgacaccggccaccatggccgcgacgtcatggccgaaggcttc
ccggaccgcatgaaggacgagcgccgttcggcggtagacgccctgtacgaggccaaccgc
ctgggccagaagaacggcaagggcttctacgcctacgagaccgacaagcgtggcaagccg
aagaaggtgttcgaccccgccgtgctcgatgtgctcaagacgatcgtgttcgagcagcgt
gaagtcactgacgaagacatcatcaactggatgatggtcccgctgtgcctggagaccgtg
cgttgcctggaagacggcatcgtcgaaaccgccgccgaagccgacatgggcctggtctac
ggcattggtttccctcccttccgtggcggtgcattgcgctacatcgacgcgatcggtgtc
gccgaattcgtcgccctggccgatcagtacgctgacctggggccgctgtaccacccgacc
gcgaagctgcgcgaaatggccaaaaatggccagcgcttcttcaactga
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