Plasmodium knowlesi: PKNH_0611800
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Entry
PKNH_0611800 CDS
T01094
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7, putative
KO
K03015
DNA-directed RNA polymerase II subunit RPB7
Organism
pkn
Plasmodium knowlesi
Pathway
pkn03020
RNA polymerase
pkn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pkn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PKNH_0611800
09124 Replication and repair
03420 Nucleotide excision repair
PKNH_0611800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pkn03021
]
PKNH_0611800
03019 Messenger RNA biogenesis [BR:
pkn03019
]
PKNH_0611800
03400 DNA repair and recombination proteins [BR:
pkn03400
]
PKNH_0611800
Transcription machinery [BR:
pkn03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
PKNH_0611800
Messenger RNA biogenesis [BR:
pkn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
PKNH_0611800
DNA repair and recombination proteins [BR:
pkn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
PKNH_0611800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHS2_Rpb7-N
S1
MOV-10_N
Motif
Other DBs
NCBI-GeneID:
7319602
NCBI-ProteinID:
XP_002261792
UniProt:
A0A5K1V5J8
A0A384LEN4
LinkDB
All DBs
Position
6:complement(533605..534371)
Genome browser
AA seq
177 aa
AA seq
DB search
MYFVIEEWKNVIIKPSQLGPRYQQFIEDMLRNSVEGQCNAKYGYIICVIRIIHCEPGRVQ
DGTSMIVVKVKYQAIVFKPFKDEVLDAVVTDVNKLGFFAQAGPLKIFISRTAIPKYFEYS
EDSHYPCFSSGVYNIKPQTTVRIKLQGIRYDLSNMFAIATINNEYLGCIESNTLHVM
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
atgtacttcgtaatagaggaatggaaaaatgtaataataaagccaagtcagctgggcccg
aggtatcagcagttcatagaagatatgctacggaacagtgtagaaggtcaatgcaatgcc
aagtatgggtacattatttgcgtcatccgtataatacattgtgaacctggacgtgtacag
gacgggacgagcatgatcgttgtgaaggttaaataccaggccatcgtcttcaagcctttt
aaggacgaggtactcgacgcagttgtcacggacgtaaacaaactgggcttcttcgctcag
gcaggcccactcaaaattttcatatcgagaacagccattcccaagtacttcgaatactcg
gaggattcccactacccctgcttttcctcaggagtttataacataaaaccgcagacaaca
gtgaggataaaactccaaggtattcgctacgatttatccaacatgtttgcaattgctacc
attaacaatgagtacttgggatgtatcgaatcgaacactttgcatgttatgtga
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