Plasmodium knowlesi: PKNH_1028100
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Entry
PKNH_1028100 CDS
T01094
Name
(RefSeq) DNA mismatch repair protein MSH6, putative
KO
K08737
DNA mismatch repair protein MSH6
Organism
pkn
Plasmodium knowlesi
Pathway
pkn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pkn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PKNH_1028100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pkn03400
]
PKNH_1028100
DNA repair and recombination proteins [BR:
pkn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
PKNH_1028100
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
HEPN_MAE_28990
AAA_29
Motif
Other DBs
NCBI-GeneID:
7321130
NCBI-ProteinID:
XP_002259762
UniProt:
A0A5K1V792
A0A384LHX7
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All DBs
Position
10:1242247..1246158
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AA seq
1303 aa
AA seq
DB search
MADFSKSNSSGPVNRKQASILSFFKTQDVKGKKVTGAGGEVPKESKIDADKNGGKELNAA
MSTMDKFAANVEMKEEGGNEVERSSETGSTVAKDPSEDKQNGCNTGFSKSDLFSDDNEDV
NTNAVKSFVGKNEIKMKESYDKVYGENNEELSTDEDIIVRKKRKIIMDSSSEDVYDGSNE
VSQDNGKHPKRKIAPGSEGVGVDGKLSNLVYEANKCIKTEETLFTNEKSSKEIMNINRRK
GEDGKKSQELDTLRNKFLSMPICLSNDKFRLYIEQYFLYCNTFEFPKWVQPQYIRDLNLR
TPDNADYDSSTIWTPPQDHPWAVEYKQAHYTPGMQQFWKIKSKNFDKIIFFKMGRFYEIF
YIDACLMHTICGLNWMGGEQKPHLGFPEQSLHLYAKKVINSGHKVVVIEQMETPKELEQR
NKETCGPKDKAIKREINEIYTKGTILHDNMLSSETRYLICFHFDDVEDLDDGVVGICNGG
VGSLPGSSSQSERSIRSKCNFGFVVSDIATSYIAVGYCNDDESRIELRTILAQLCPAEIL
YASKNINKEVLSIFKNIPAEPELTGVSSFPNIIASLDEIRKYFETIPPSLEMHKEQNSVI
CAFGGFIVYLRSLLLDKKIFRFCKIEHYDLFKRENYMVLDATALKHLEILETQSGETKNS
LFDYVNKTCTNFGARNMRRWICSPLLDCTKINERLDVVDFLKKNEHILSLIRLKLKKLPD
IERLLNKICIQASQSERGAVFFDNIVNTKLKEFMTFLNAFKEIGSMLIEINSIEKDEEEL
PKRLFEISNTPDRRSLVKNIQGNYPHIEQITTEFLKKIEFDGDKEYKPAEGCDEAIDQIN
KKEREVEIELNNILTSMKKKMKISSLKYVHAKYKYEVECPENVPKVFLKDVEITSAKKGF
IRFQNDEIKQCVEMLEDIVQEKKDAIYPFFKKIFHLFYAHYEKYVSACRLVSELDCLQAF
AFVALNTSFVLTRPILHPMRPNVNVEDGSIEDGNDEDGNVENGNDENGNDDTGEINQRNK
STVSVMGRSADSHGNEPFLILENNIHPVVATLMPNFISNNIYMGCKQENQSTLLLTGPNM
GGKSTLLRQTAISVILAQIGAFVPSTYCELTVVDKIFTRLGSSDNLFEGKSTFLVELEDI
SNMLKQSTKYSLAILDELGRGTSSFDGTAIALSTLEQISDVVKCRCIFSTHYHLLVEEVK
HNNNISNYHMSLSIDDQQEKIIFLYKFIKGVCPKSFGIHIAKLAGLPKEIIDLAHEKSTL
FENVTDEFCKIIKYKNIVRSLLSAPDDQKLGALFRKYRAEFTS
NT seq
3912 nt
NT seq
+upstream
nt +downstream
nt
atggccgatttcagcaagtccaactcttccgggcctgtaaacaggaaacaggcgtcaatt
ctgagtttcttcaagacacaggatgtcaaaggaaagaaggtgactggcgcagggggggag
gtgcccaaagaaagcaaaatcgatgcagataagaatggtggaaaggaactgaacgcggcg
atgagtacgatggacaaatttgcagccaatgttgagatgaaggaggaggggggaaacgaa
gtagagcgaagttccgaaacgggttccactgtagcgaaggacccaagtgaagataagcaa
aatggatgcaacactggattctccaaatcggatttattctccgatgataatgaagatgtc
aacacaaacgcggttaaaagtttcgtgggaaagaacgaaatcaaaatgaaggagagctat
gacaaggtatatggagaaaacaacgaggagttgagcaccgatgaagacatcatcgtgagg
aagaagagaaagattataatggattcatcaagtgaggatgtatacgacggatctaacgag
gtaagtcaagataatggaaagcatcccaaaaggaagatagccccaggaagtgaaggggtt
ggggtggatgggaagttaagcaatctggtttatgaggcgaataagtgtatcaagacggaa
gaaacactattcacgaacgagaaaagttcaaaggagattatgaatatcaaccgtcgaaag
ggagaagatggaaagaagtctcaggaattggatacattaaggaacaaattcctaagcatg
ccaatatgtttgtcaaatgataaattcaggctgtacatagaacaatacttcctgtattgc
aatacctttgaatttccaaaatgggttcagccacaatatattcgtgatttgaacttaagg
accccagacaatgcagactatgatagctcaactatttggacccccccacaagatcatcca
tgggcagtggagtacaaacaagctcactacactccaggaatgcaacagttttggaaaata
aaatcgaaaaattttgacaaaataatattttttaaaatggggagattttatgaaatattt
tatatcgatgcttgtttgatgcataccatatgtggattgaattggatgggtggagaacag
aagcctcacttgggatttccagaacaatccctacatttgtatgcgaagaaggttataaac
agtgggcacaaggtggttgtaattgaacagatggagacaccaaaggaattggaacaacgt
aataaagaaacctgtggtccgaaggataaagctattaagagagaaattaatgaaatttac
acaaaggggactattcttcatgataatatgctcagttcagagacgaggtacttgatctgt
tttcattttgatgatgtggaagatttagatgatggagtggtgggtatttgtaatggaggc
gtaggaagtctgccaggttcttcatctcagagtgagcgttcaatcaggagcaaatgcaat
tttggattcgtcgtaagcgacattgcgacatcctacatcgctgtagggtactgtaacgat
gatgagtcacgtatcgaactgagaacaatattggcgcaactatgtccggcggaaatttta
tacgcttcgaaaaatatcaataaggaggtgttgtctatttttaaaaatattccggctgaa
ccagagctcacaggtgtgagttcctttccgaatataattgcttctctagatgaaataagg
aaatattttgaaaccattcccccaagtttagaaatgcataaagaacagaatagtgtgatt
tgtgcatttggggggttcattgtttatctaagatcacttttattggacaagaaaattttt
cgtttttgcaaaatcgaacattatgatctttttaagagggagaattatatggttctagat
gcaactgcattgaaacatttggaaatattggagactcaatcaggggaaacaaaaaactct
ctttttgattacgtgaacaaaacatgcactaattttggagcgagaaatatgaggcgttgg
atctgtagcccactactggattgtacaaagataaatgagcgactagacgttgtagatttt
ttaaaaaagaatgaacatattttatcactaatcagattgaaactaaagaagctacccgac
atagagagactgttgaataaaatttgtatacaagcttctcagagcgaaaggggagctgtt
ttcttcgacaacatagtcaataccaagttgaaagaatttatgacattcctaaacgccttc
aaagaaataggaagtatgcttatcgaaattaacagtattgaaaaagacgaagaggaattg
ccaaagaggctttttgaaataagtaacaccccagataggagaagtttagtgaaaaatata
caagggaattacccacatatagaacagataaccacagagtttttaaaaaaaatcgaattc
gatggggataaggagtacaaaccggcggaagggtgtgatgaagccattgatcagattaat
aaaaaagagagggaagtggaaattgaactcaacaatattttaacaagtatgaaaaaaaag
atgaaaatttcttcactgaaatatgtgcatgcgaaatataagtacgaggtggagtgcccg
gagaatgttccaaaagtttttttaaaggatgtagaaataacgtcagctaagaaaggattc
attcgttttcaaaatgacgaaataaaacaatgcgttgaaatgttggaggatatagttcag
gaaaagaaggatgccatttatccgttctttaagaaaatatttcacttgttctatgctcat
tatgagaaatacgtatctgcatgcagactggtatccgagctagactgtctgcaggccttt
gccttcgtggcgctcaatacatcattcgtgctcacacgccccattctgcacccgatgcgc
ccgaacgtaaacgtcgaagacggaagcatcgaggacggaaacgacgaggacggaaacgtc
gagaacggcaacgacgagaacggcaacgacgacactggagagatcaaccaaaggaacaag
agcaccgtaagtgtaatggggcgcagcgcggatagccatgggaacgaaccctttctcatc
ctcgaaaataatattcaccccgtggtggccacgctcatgcccaatttcatctctaacaac
atatacatgggttgcaaacaggagaatcagtcaacgttgctcctgacgggtcccaacatg
ggtggaaaaagcaccctgctaaggcaaacggcgatatcggttattctagcacagatagga
gccttcgttccatctacctactgtgagttgactgtagttgataaaattttcacacgacta
ggatctagtgataatctgttcgaagggaaaagtaccttcctcgtggagttggaagatatt
tcgaacatgttaaagcaaagcacaaaatacagtttagccattctggacgaactgggtaga
ggaacctcttcctttgatggcacggctattgctctttcgacgttggaacaaatttcggat
gtcgtaaaatgcaggtgcatattctccacacattaccatctcctagtcgaggaagtcaaa
cacaacaacaatatctcaaactatcacatgagcctaagtatagatgatcaacaggaaaaa
attattttcctctataaatttattaagggagtttgtccaaagtcctttggtattcacatt
gctaagttggctggactccccaaagaaattatcgacttagcacacgagaaatctaccctc
tttgagaacgtaacggatgaattctgcaaaattattaagtacaagaatattgtgcgctcc
ctcctcagtgcccccgatgaccaaaaattgggtgccctcttccgcaaataccgagcagag
ttcacctcctga
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