Paenibacillus konkukensis: SK3146_06586
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Entry
SK3146_06586 CDS
T09860
Symbol
rsmD
Name
(GenBank) Ribosomal RNA small subunit methyltransferase D
KO
K08316
16S rRNA (guanine966-N2)-methyltransferase [EC:
2.1.1.171
]
Organism
pkp
Paenibacillus konkukensis
Brite
KEGG Orthology (KO) [BR:
pkp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pkp03009
]
SK3146_06586 (rsmD)
Enzymes [BR:
pkp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.171 16S rRNA (guanine966-N2)-methyltransferase
SK3146_06586 (rsmD)
Ribosome biogenesis [BR:
pkp03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
SK3146_06586 (rsmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cons_hypoth95
MTS
Methyltransf_15
Methyltransf_31
PrmA
Methyltransf_25
MethyltransfD12
RsmJ
Methyltrans_SAM
UPF0020
TRM
DNA_methylase
BpsA_C
tRNA_U5-meth_tr
Spermine_synth
Methyltransf_24
N6_N4_Mtase
Met_10
Methyltransf_16
FtsJ
FSH1
Methyltransf_12
Methyltransf_3
Methyltransf_11
PLU-1
Secretin_N
Methyltransf_18
Motif
Other DBs
NCBI-ProteinID:
UQZ87289
LinkDB
All DBs
Position
7542204..7542764
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AA seq
186 aa
AA seq
DB search
MRVISGSAKGRPLKAVPGMGTRPTTDKVKEAIFSMIGPYFEGGHVLDLFAGTGGLSIEAL
SRGMERAVLTDIDKKSIDTIRQNLQATGFTDQAEIYRNDAQRAVKALTKRGVKFDLVFLD
PPYRLKLVRELVEQLDEADMLNSYATIVMEHDAEDAYEEPIGRLEWVRRAEYGDTAITIY
KNKAQE
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgagagtcatatcagggagtgccaagggaaggccattgaaggctgtacctggcatgggc
acgcggcctaccaccgataaggtgaaggaggctatttttagcatgatcggcccttatttc
gaaggaggtcatgtgctggatctgttcgcaggcaccggcggattaagtattgaagcgctg
agccgcggaatggagagagcggtgttgaccgacatcgacaagaagtcgatcgacacgatc
cggcaaaatttgcaggcgaccggattcacggaccaggccgagatataccgaaacgacgcg
cagagagccgtcaaggcattaacgaagcggggagtcaaatttgatctggtgtttttggac
ccgccataccggctcaaactggttcgggagctggtggagcaattggatgaggccgatatg
ctgaattcctatgcgaccatcgttatggaacatgatgccgaggatgcttacgaggagccg
atcggccgtttggaatgggttcgcagagccgaatacggagacacggccataacgatttat
aaaaacaaagcgcaagagtag
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