Pseudomonas koreensis: AYO71_04510
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Entry
AYO71_04510 CDS
T04647
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
pkr
Pseudomonas koreensis
Pathway
pkr00730
Thiamine metabolism
pkr01100
Metabolic pathways
pkr01240
Biosynthesis of cofactors
pkr04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
pkr00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
AYO71_04510
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
AYO71_04510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pkr03016
]
AYO71_04510
Enzymes [BR:
pkr01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
AYO71_04510
Transfer RNA biogenesis [BR:
pkr03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
AYO71_04510
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
QueC
Rhodanese
tRNA_Me_trans
ADH_N_2
Motif
Other DBs
NCBI-ProteinID:
AMT86827
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Position
1004862..1006316
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AA seq
484 aa
AA seq
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MKLIVKVFPEITIKSRPVRTKFIRQLAKNIRTVLRDLDPAVVVNGVWDNLELETRVTDPK
ALKEMGERLTCMPGIAHFLQIDEYPLGDFDDITEKCKQHYGDALAGKIFSVRCKRAGKHA
FSSMDVEKYVGSKLRRECGAAGIDLKAPQIEVRIEVRDKRLFVIHSQHNGIGGYPLGALE
QTLVLMSGGFDSTVAAYQIMRRGLMAHFCFFNLGGRAHELGVMEVAHFIWKKYGSSQRVL
FVSVPFEEVLGEILGKVDNSHMGVVLKRMMLRASSEIAERLHIDALVTGEAISQVSSQTL
PNLSVIDCVTDKLVLRPLIVAHKQDIIDTANEIGTADFARHMPEYCGVISVNPKTAAKRG
RVEHEEKEFDMAVLERALANAKLVPIDRVIDELGQDLQIEEVSEALAGQIVIDIRHPDAA
EDDPLELAGIEVQTMPFYAVNARFKELDPTRQYLLYCDKGVMSRLHAHHLLSEGHANVRV
YRPS
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttatcgtaaaagtcttccccgagatcaccatcaaaagccgacctgtccggacg
aaattcatccgccagttggccaagaacatccgcaccgtgctccgtgacctggacccggcc
gtggtggtgaacggcgtgtgggacaatctcgagctggaaacccgcgttaccgaccccaaa
gccttgaaagagatgggcgaacgcctgacctgcatgccgggtatcgcgcattttctgcag
atcgacgagtacccgctgggcgacttcgacgacatcaccgaaaagtgcaaacagcactac
ggcgatgcactggccgggaagattttctcggtgcgctgcaagcgcgcaggcaagcatgcc
ttcagctcgatggacgtggaaaaatacgtcggcagcaagctgcgtcgcgagtgcggtgcg
gccggaatcgaccttaaagcaccgcaaatcgaagtccgtatcgaagttcgcgacaaacgg
ttgttcgtgattcacagccagcacaacggcatcggcggctacccgctgggtgcgttggag
cagacgctggtattgatgtccggcggctttgattcgaccgtggcggcttatcagatcatg
cgtcgcggcctgatggcgcacttctgcttcttcaatctcggcgggcgtgcccacgaattg
ggcgtgatggaagtcgcgcacttcatctggaagaagtacggcagctcgcaacgcgtgcta
tttgtcagtgtgccgttcgaggaagtgctgggcgaaattctcggcaaagtcgataacagt
catatgggcgtggttttgaagcgtatgatgttgcgcgcctcgtccgagatcgccgaacgc
ctgcacatcgatgcactggtgaccggtgaagcgatctcccaggtgtcgagccagacgctg
ccgaacctgtcggtgatcgactgcgtgaccgacaagctggtgctgcggccgctgatcgtc
gcgcacaagcaggacatcatcgacaccgccaacgagatcggcaccgccgatttcgcccgg
cacatgccggaatactgcggcgtgatttcggtcaaccccaagaccgccgccaagcgtggc
cgggttgagcacgaagagaaagaattcgacatggcggtactcgagcgcgcgctcgccaac
gccaaactggtgccgatcgatcgggtaatcgacgagttgggccaggatttgcagattgaa
gaagtcagcgaagcgctggccggtcagatcgtgatcgacatccgccacccggatgccgcc
gaggatgacccgctggagctcgccggcatagaggtacagacgatgccgttctatgcagtg
aacgcacgtttcaaggaactggaccctactcgccagtacctgctgtattgcgacaaaggc
gtgatgagtcgcctgcatgcccaccatttgctcagtgaggggcatgccaatgtgcgcgtt
tatcgaccgagctaa
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