Pseudomonas koreensis: AYO71_24360
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Entry
AYO71_24360 CDS
T04647
Name
(GenBank) diguanylate cyclase
KO
K21024
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
pkr
Pseudomonas koreensis
Pathway
pkr02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pkr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
AYO71_24360
Enzymes [BR:
pkr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
AYO71_24360
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
dnstrm_HI1420
FtsL
Motif
Other DBs
NCBI-ProteinID:
AMT90531
LinkDB
All DBs
Position
5436919..5438970
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AA seq
683 aa
AA seq
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MKLELKNSLSVKLLRVVLLSALIVGVVLSCAQIVFDAYKTRQAVAGDAERILDMFRDPST
QAVYSLDREMGMQVIEGLFQDDAVRQASIGHPNEAMLAQKSRELQHSNSRWLTDLILGQE
RTFTTQLVGRGPYSEYYGDLSITLDTATYGEGFIVSSVIIFISGVLRALALGLVLYLVYH
WLLTKPLSRIIEHLTEINPDRPSEHKIPQIKGHEKNELGLWINTANQLLESIERNTHLRH
EAENSLLRMAQYDFLTGLPNRQQLQQQLDKILVDAGKLQRRVAVLCVGLDDFKGINEQFS
YQTGDQLLLALADRLRAHSGRLGALARLGGDQFALVQADIEQPYEAAELAQSILDDLEAP
FALDDQEIRLRATIGITLFPEDGDSTEKLLQKAEQTMTLAKTRSRNRYQFYIASVDSEMR
RRRELEKDLRDALIRDQFYLVYQPQISYRDHRVVGVEALIRWQHPEHGLVPPDLFIPLAE
QNGTIIAIGEWVLDQACKQLREWHDQGFVDLRMAVNLSTVQLHHAELPRVVNNLLQMYRL
PPRSLELEVTETGLMEDITTAAQHLLSLRRSGALIAIDDFGTGYSSLSYLKSLPLDKIKI
DKSFVQDLLDDDDDATIVRAIIQLGKSLGMQVIAEGVETAEQETYIISEGCHEGQGYHYS
KPLPARELGIYLKQAQRSNAAIL
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
ttgaagctggaactcaagaacagcttgtcggtgaagttgctccgggtcgtgctcctgtcg
gcattgatcgtaggcgtagtcttgagctgcgcgcagattgtcttcgatgcctacaagacc
cgtcaggcggttgccggcgacgccgagcgcatcctcgacatgttccgtgatccgtcgacc
caggccgtctacagcctggaccgggaaatgggcatgcaggtgatcgaagggctgttccag
gacgacgccgtgcgtcaggcctctatcggccaccccaacgaagccatgctcgcgcagaaa
tcccgcgaactgcagcattccaatagccgttggctgaccgacctgattctcggccaggaa
cgcaccttcaccacgcaactggtcggccgcggcccctacagcgaatactacggcgacctg
agcatcaccctcgacaccgccacctatggcgaagggtttatcgtcagctcagtgatcatt
ttcatttccggggtgttgcgcgcactggcgttgggcctggtgctgtatctggtctatcac
tggctgctgaccaaaccgctgtcgcgaatcatcgagcacctcaccgaaatcaacccggat
cgtcccagcgagcacaagattccgcagatcaagggccacgaaaagaacgaactgggcctg
tggatcaatactgccaaccagttgctcgagtccatcgaacgcaacactcacctgcgccac
gaagcggaaaacagtctgttgcgcatggcccagtacgacttcctcaccggcctgccgaac
cgccagcaattgcagcagcaactggacaagattctcgtcgatgccggcaaattgcagcgc
cgcgtcgcggtgttgtgcgtcggcctggatgacttcaagggcatcaacgagcaattcagc
taccagaccggcgaccaattgctgctggccctggccgatcgtctacgtgcccacagtggt
cgcctgggcgccctcgcccgcctgggcggcgatcagttcgcgctggtgcaggccgacatt
gaacagccttacgaagcagcagaactggcgcagagcattctcgatgacctcgaggcgccg
ttcgccctcgacgatcaggagatccgcctgcgcgcgaccatcggcatcaccctgtttccg
gaggacggcgacagcaccgagaagctgttgcagaaagccgagcagaccatgaccctggcc
aagacccgctcgcgcaatcgctatcagttctacatcgccagcgtcgacagcgagatgcgc
cgtcgtcgcgagctggaaaaagatttgcgcgatgcgctgatccgcgaccagttctacctc
gtctatcagccgcagatcagctatcgcgatcaccgcgtggttggcgtcgaagcgctgatt
cgctggcaacatccggaacacggtctggtgccgccggacctgttcatcccgctggccgaa
cagaacggcacgatcatcgccatcggcgagtgggtactcgatcaggcctgcaagcaattg
cgcgaatggcacgatcagggttttgtcgatctgcgcatggcggtcaatctgtccaccgtg
caactgcaccacgccgagctgccacgggtggtcaacaacctgctgcaaatgtaccgcctg
ccgccgcgcagcctggaactggaagtcaccgaaaccggcctgatggaagacatcaccacc
gccgcccagcatctgctcagcctgcgccgctccggtgcgctgatcgcgatcgacgacttc
ggcaccggctactcgtccctcagctatctgaaaagcctgccgctggacaagatcaagatc
gacaagagcttcgtgcaggacctgctcgatgacgacgatgacgcgaccatcgttcgggcg
atcattcaactgggcaagagcctgggcatgcaggtgattgccgagggcgtggaaaccgcc
gagcaggaaacctacatcatttccgagggttgccacgaaggtcagggctaccactacagc
aaaccgctgccggcgcgggagctgggtatttacctcaagcaggcgcaacgcagcaacgcg
gctattttataa
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