Poecilia latipinna (sailfin molly): 106940580
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Entry
106940580 CDS
T08005
Symbol
polr1a
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
plai
Poecilia latipinna (sailfin molly)
Pathway
plai03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
plai00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
106940580 (polr1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plai03021
]
106940580 (polr1a)
Enzymes [BR:
plai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
106940580 (polr1a)
Transcription machinery [BR:
plai03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
106940580 (polr1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Nop14
HMG_box
SURF2
Motif
Other DBs
NCBI-GeneID:
106940580
NCBI-ProteinID:
XP_014878846
Ensembl:
ENSPLAG00000021389
UniProt:
A0A3B3VZ34
LinkDB
All DBs
Position
Unknown
AA seq
1689 aa
AA seq
DB search
MLFSKEVPWRRLEGMSFGLYSPEEIRKLSVKTITNSKFLDAVGNVAQNSLYDLALGPTDT
KEICSTCCQDFNNCPGHFGHIELPLPVYNPLFFDKLYLLIRGSCLSCHMLTCPRAAIHLL
VNQLRLLERGAMEEVHLVERVLNQHLEENPKATGDEIEQVLREFTSMVIGANAEASQNSK
PIKHLVEKKSSLINDFWRVQLNTKKCPYCRVGRSTVRREHNSKLIITMPTGGQTDENTED
LLTGKRVFLTASTAREHISKLWEKEGFFLKFLFPGLEESSGSEGQKSFYPDLFFLELLVV
PPCRYRPINRLGDQMFTNGQTVNMQAVMKDCSIIRKLLSLIAGEKQTEEVEEVTLDPEDQ
TFLSGISGVTLPDKLYNMWIRLQSHVNIVFDSEMDKLITDKYPGIRQILEKKDGLFRKHM
MGKRVDYAARSVICPDMYIGTNEIGIPMVFATKLTYPQPVTPWNVKELRQAVLNGPNVHP
GASMVINEDGRKTILSPSSAAQREAVAKQLLTPCPGPHKMPMKIVNRHIKNGDVLLLNRQ
PTLHRPSIQAHCARILPGEKVLRLHYANCKAYNADFDGDEMNAHFPQTELGRAEAYTLVS
TNQQYLVPKDGKPLAGLIQDHMVSGTKMTIRGCFFTKDQYTELVYRGLTDKTGRIRLLAP
ALLKPQQLWTGKQVVSTLLLNILPDKAVPLNLTGKAKIPGKAWIQLPPRSSPGYNPDSMC
ESQVVIRQGELLVGVLDKAHYGSSPYGLVHCCYELYGGETSGKLLSCLARLFTAYLQLYR
GFTLGVEDILVKPGANMRRKQIIQESLKIGTTALQAAFKLPPSMTPAEAASRWQDAHLSP
DQRDFSLADHKFKEVANQVNNDINKVCMPVGLHTPFPDNNLQLMVQSGAKGSTVNTMQIS
CLLGQIELEGRRPPLMPSGKFLPCFQPYDPSPGAGGFVSGRFLTGIKPQEFFFHCMAGRE
GLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGSVVQFLYGEDGLDIPKTQFLQ
PRQFPFIENNYEVIRKSQNLDSVLARLDPHTAARHFTAIQRWKAKRELACPRRGAFLLFS
QKKLAKLREAMPSTEPLPAQDPAVLQLVKDWHSLDEAGRAKYARRSSRCPEPTLGLFRPD
VCFGSVSENFHDITEKYLQNRGNATEDDMETQRLRQLLHYKWQRSLCDPGEAVGLLAAQS
IGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASSNIKTPMMSVPVLNNKKALKRA
KTLRKRLSRVCLAEVLQKVDVVETLRIETYQRLQLFKVTFHFLPPERYRDDKLLTPHQIL
RYMETRFFRLLLEAIKKRTAKLASIAVETRKATPGDKNMDEDGTAGAQDGGGEEEEEGEV
VDDQGDEGDADASDAKRKSKQAEEVDYESEDEGEGDDAEEDEGEEENSQANAVEETQPES
ADTGEQQQQEEKKKKEMKAEQGGESSVQMRVNSVLSSNSAIQRYSFDQQEELWCEVELEF
PMNRIHFDLTSVLSTLAQNAVIMETRGLTRCLLSETTTKSGEKQTVLNTEGINMHEIFKY
NDILDVNKLYSNEVHAMASTYGIEVALKVIEKEIKDVFAVYGIEVDPRHLSLVADYMCFE
GIYKPLNRHAIMSNSSPLQQMTFETSFKFLKQATMLGSRDQLVSPSACLVVGKVVKGGTG
LFELKQPLQ
NT seq
5070 nt
NT seq
+upstream
nt +downstream
nt
atgttgttttccaaagaagtgccatggcggcggctggagggcatgtcgtttggcttgtac
tcacccgaagaaataaggaagttgagcgtgaaaaccatcaccaactccaagtttctggac
gctgttggaaatgtggcccagaacagtttgtatgacctggctctggggccaacagacacc
aaagagatttgttccacctgctgtcaggatttcaacaactgtccaggacactttggacac
atagagctgcctctaccagtctacaacccactgttctttgataaactctacctgttgatc
cgcggctcgtgcctgtcgtgtcacatgttgacatgtccccgcgccgccatccacctgctg
gtcaaccaactccggttactggagcgtggagccatggaggaggtccaccttgtggagaga
gttcttaatcagcacctcgaagagaaccccaaagccactggagatgagatcgagcaggtg
ctgagggagttcaccagcatggtcattggagcgaacgctgaggcttcacagaactccaaa
cccattaaacatctggttgagaagaagagcagcctgataaacgacttctggagggtccag
ctgaacaccaagaagtgtccgtactgcagagttggcaggtcaacggtgcgtcgcgaacac
aacagcaagctgatcatcaccatgccaacgggaggacaaactgatgaaaacacagaagat
cttctgactggaaagagagtgttcctcactgccagcaccgccagggagcacatcagtaaa
ctctgggagaaagaaggtttcttcctgaagttcctgtttcctggtctggaggagagctca
gggtctgagggacagaagagtttctacccagacctgttcttcctggagctgctggtggtt
ccaccctgcaggtatcgccccatcaatcgccttggcgaccagatgttcaccaacggccag
acggtcaacatgcaggctgtgatgaaggactgcagcatcatcaggaagcttctgtctctc
atagcaggagagaagcaaactgaggaggtggaggaagtgacgttggacccagaggatcag
acattcctgtcaggaattagcggagtgacgttaccagataagctctataacatgtggatc
cgcctgcagagccacgtcaacatcgtcttcgacagtgagatggacaaactgataacggac
aaataccccgggatcagacagatcctggagaagaaggatggattgttccggaagcacatg
atggggaagcgggtggactacgccgcccggtccgtcatctgtcctgacatgtacatcgga
accaacgagatcgggatccccatggtgtttgccaccaagctgacctaccctcagcccgtc
acgccctggaatgtgaaggagctccggcaggccgtcctcaatgggcccaacgtccacccc
ggcgcctccatggtgattaacgaggacggcaggaagaccatcctgtcgccgagcagcgcc
gcacagagggaggcggtcgccaagcaactgctgacgccctgtcccggtccacacaagatg
cccatgaagatcgtgaatcgacacataaagaacggagacgttctgctactcaacagacag
cccaccctgcacagaccctccattcaagcccactgcgctcgcatcttacctggagagaag
gtcctgcggcttcactacgccaactgcaaggcgtacaacgccgactttgacggagacgag
atgaacgcccacttccctcagaccgagctgggccgagccgaggcctacacgttggtcagc
accaaccagcagtacctcgtccccaaggacggtaaacctttagcgggcctcatccaggac
cacatggtgtcaggaaccaagatgaccatcagaggctgcttcttcaccaaggaccagtac
actgagctggtgtaccgagggctgaccgacaagacgggccggatcagactgctggccccg
gccctcctcaaacctcagcagctgtggaccggaaagcaggtcgtctccactttactgctg
aacatcctcccagacaaagccgtcccccttaacctcactggcaaagccaaaatccccggc
aaggcttggatccagctgccgcctcgatcttctccggggtacaacccggatagcatgtgt
gagtcacaggtggtgatccgtcagggcgagctgctggtcggcgttctggataaagcacac
tacggctcgtcgccctacggtttggtccactgctgctatgaactgtacggaggggagacc
agcgggaagctgctcagctgcctggctcgactcttcaccgcctacctgcagctctacaga
ggcttcacgctcggagtggaagacattctggtgaaacctggagccaatatgcggaggaaa
caaatcatccaagagtctctgaaaatcggcaccacggccttgcaggctgccttcaaactg
cctcccagcatgactccggctgaagccgccagtcggtggcaggacgctcacctcagcccc
gaccagagagactttagcttggccgatcacaaattcaaggaagtggccaaccaagtgaac
aacgacatcaacaaggtgtgtatgccggtcggactgcacaccccgttcccagacaacaac
ctccagctcatggtgcagtctggagctaaaggctccaccgtcaacaccatgcagatctcc
tgcctgctgggtcagatcgagctggagggccgcaggccacccctgatgccatcaggaaag
tttctaccttgcttccagccgtacgacccttcacctggagcagggggcttcgtttctgga
cgcttcctcacaggaatcaagccacaggagtttttcttccattgcatggctgggagagaa
ggcctggtggacacggctgtgaaaacgtcccgatcaggatatctgcagagatgcatcata
aagcacctggagggtctggtggtgcagtacgacctgaccgtcagagacagcgacggctcc
gtggtccagttcctgtatggcgaggatggactggacatccccaagacccagttcctgcag
ccaaggcagttcccgttcatcgagaacaactacgaggtcatcaggaagtcacagaacctg
gacagcgttctggcccgtttggaccctcacactgcagcccgccacttcacagccatccag
cgctggaaagcaaagagagagctggcatgtccccgcagaggagcctttctactgttttcc
caaaagaagctagcgaaactacgagaggccatgccgtcaacagagccgctgcccgctcaa
gaccctgcagtgctgcagttggtgaaggactggcactctctggacgaagccggcagagcc
aaatacgccaggcggtcgtcccgctgccccgagccgaccctgggcctgttcaggcccgac
gtctgcttcgggtcggtgtcggaaaacttccatgacatcaccgagaaatacctgcagaac
agaggcaacgccacagaagatgacatggagacacagaggctgcggcagctgctccactat
aagtggcagcgctccctgtgtgacccaggggaagctgtgggcctgctggcagctcagtcc
ataggtgagccctccacccagatgaccctcaacaccttccacttcgcgggcagaggagag
atgaacgtcactctgggaatccctcgactgagggagatcctaatggtggccagttccaac
attaaaacccccatgatgagcgtcccggtgctgaacaacaagaaggccttgaagagggcc
aaaacgctgcgaaagcggctcagcagagtctgcctggctgaggtgctgcagaaggtggat
gttgtcgagacgcttcggatcgaaacttatcaaagactgcaattgtttaaagtcaccttt
cacttcctgcctcccgagcgttaccgtgacgacaagcttttaactccccatcagatcctc
cgctacatggagacaaggtttttccgtctcctcctggaagccattaaaaagcgcacagcc
aagcttgcctccatcgccgtggagacgaggaaggccacccctggagataaaaacatggac
gaggacgggaccgcgggggcccaggacggaggtggagaagaggaggaggaaggagaggtg
gttgatgaccagggggatgaaggagacgccgacgcgtcagatgccaagaggaaaagcaag
caggcggaggaggtagactacgaaagcgaagacgagggcgaaggcgacgatgccgaagag
gatgagggcgaagaggagaacagccaggcaaacgctgtggaggagacccagcctgagtca
gcagacactggagagcagcagcagcaggaggagaagaagaagaaagaaatgaaagcggag
caagggggagagtcctcggtccagatgagggtgaactcggttctgtcgtctaactcggcc
atacagagatactccttcgatcagcaggaagaactctggtgtgaggtggagctggaattc
cccatgaacaggatccacttcgacctgacctcggtgctgtcgactctggcccagaacgcc
gtcatcatggagacccggggcctgacgcggtgcctgctgagcgagaccacgaccaagtct
ggggaaaaacagacggttctcaacacagagggcatcaatatgcatgaaatctttaagtac
aacgatatcctggacgtcaacaaactgtactccaatgaggtccatgccatggccagcacc
tacgggatcgaggtggctctgaaagtcatagagaaggagatcaaagacgtctttgcagtt
tatgggattgaggttgaccccaggcatctgtcattggtggcagactacatgtgtttcgaa
ggcatctacaagccgttaaaccgacacgccatcatgtcgaactcgtcccctctgcagcag
atgaccttcgagaccagcttcaagttcctcaaacaggccaccatgctggggtcacgtgat
cagctggtttcaccctccgcctgcttggttgtggggaaggtggtcaaaggtggaacaggg
ctgtttgaactgaagcagcctctgcagtag
DBGET
integrated database retrieval system
