Poecilia latipinna (sailfin molly): 106945780
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Entry
106945780 CDS
T08005
Symbol
polr2a
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
plai
Poecilia latipinna (sailfin molly)
Pathway
plai03020
RNA polymerase
plai03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
plai00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
106945780 (polr2a)
09124 Replication and repair
03420 Nucleotide excision repair
106945780 (polr2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plai03021
]
106945780 (polr2a)
03400 DNA repair and recombination proteins [BR:
plai03400
]
106945780 (polr2a)
Enzymes [BR:
plai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
106945780 (polr2a)
Transcription machinery [BR:
plai03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
106945780 (polr2a)
DNA repair and recombination proteins [BR:
plai03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
106945780 (polr2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_R
Motif
Other DBs
NCBI-GeneID:
106945780
NCBI-ProteinID:
XP_014885187
Ensembl:
ENSPLAG00000007399
UniProt:
A0A3B3TYC6
LinkDB
All DBs
Position
Unknown
AA seq
1907 aa
AA seq
DB search
MHGPPSGDSACPLRTIKRVQFGVISPDELKRMSVTEGGIKYPETTEGGRPKLGGLMDPRQ
GVIERSGRCQTCAGNMTECPGHFGHIELAKPVFHVGFISKIMKILRCVCFFCSKLLVDSN
NPKIKEILVKSKGQPRKRLTHVYELCKGKNICEGGEEMDNKFGMEPQETEEDITKEKGHG
GCGRYQPRIRRSGLELYAEWKHVNEDSQEKKILLSPERVHEIFKRISDEEDIILGMDPKF
ARPEWMIVTVLPVPPLAVRPAVVMQGSARNQDDLTHKLADIVKINNQLRRNEQSGAAAHV
IAEDVKLLQFHVATMVDNELPGLPRAMQKSGRPLKSIKQRLKGKEGRVRGNLMGKRVDFS
ARTVITPDPNLQIDQVGVPRSIAANMTFPEIVTPFNIDRLQELVRRGNSQYPGAKYIIRD
NGDRIDLRFHPKPSDLHLQIGYKVERHMCDGDIIIFNRQPTLHKMSMMGHRVRILPWSTF
RLNLSVTTPYNADFDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQDTL
TAVRKFTKRDVFLERGEVMNLLMFLSTWDGKMPQPAILKPRPLWTGKQIFSLIIPGHINV
IRTHSTHPDDEDSGPYKHISPGDTKVIVENGELIMGILCKKSLGTSAGSLVHISYLEMGH
DITRLFYSNIQTVVNNWLLIEGHSIGIGDSIADAKTYLDIQNTIKKAKQDVIEVIEKAHN
NELEPTPGNTLRQTFENQVNRILNDARDKTGSSAQKSLSEYNNFKSMVVAGSKGSKINIS
QVIAVVGQQNVEGKRIPFGFKHRTLPHFIKDDYGPESRGFVENSYLAGLTPTEFFFHAMG
GREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGEDGLAGENVE
FQNLATLKPSNKAFEKKFRFDCTNERALRRVLQEDVVKDVLTNAHVQSVLEKEFEKMRED
REILRAIFPTGDSKVVLPCNLARMIWNAQKIFRINTRTPTDLNPLRVVEGVHELSKKLVI
VNGDDPLSRQAQENATLLFNIHLRSTLCSKRMTEEFRLSTEAYDWLLGEIETKFNQSIAH
PGEMVGALAAQSLGEPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKRPKTPSLTVF
LLGQAARDAERAKDILCRLEHTTLRKVTANTAIYYDPNPQNTVVAEDQEWVNVYYEMPDF
DVTRISPWLLRIELDRKHMTDRKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIRIM
NSDENKFQEDEEVVDKMDDDVFLRCIESNMLTDMTLQGIEQISKVYMHLPQTDNKKKIII
TEDGEFKALQEWILETDGVSLMRVLSEKDVDPVRTTSNDIVEIFTVLGIEAVRKALEREL
YHVISFDGSYVNYRHLALLCDTMTCRGHLMAITRHGINRQDTGPLMKCSFEETVDVLMEA
SSHGECDPMKGVSENIMLGQLAPAGTGCFDLLLDAEKCKYGMEIPTNIPGISVAGPTGMF
FGSVPSPMSGMSPAMTPWNTGATPAYGAWSPSVGSGMTPGAAGFSPSAASDASGFSPGYS
PAWSPTPGSPGSPGPVSPYIPSPGGAMSPNYSPTSPAYEPRSPGGYTPQSPGYSPTSPSY
SPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS
PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS
PTSPSYSPTSPNYTPTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSP
SYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSP
TSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPAISPDDSDEENN
NT seq
5724 nt
NT seq
+upstream
nt +downstream
nt
atgcacggaccgccctccggtgacagcgcatgcccattgcgcacgatcaagagagttcag
ttcggcgtcatcagcccagatgaacttaaacggatgtcggttaccgaagggggtatcaaa
taccctgaaaccacagaaggaggacgtcctaagcttggtggccttatggatccgagacaa
ggggtcatagaacgcagtgggagatgtcagacatgtgcaggcaacatgactgaatgtccg
ggccacttcggacacatagagctggcgaagccggttttccacgtcggcttcatatcaaaa
ataatgaagattcttcgatgcgtctgcttcttttgctcaaaactgctggtggattccaac
aatccgaagatcaaagaaatccttgtgaaatccaagggccagcccaggaagcgtctaacc
cacgtctacgagctgtgcaaaggcaaaaacatatgtgagggaggggaagagatggacaac
aaatttggaatggagccacaggagacggaggaggacattaccaaggagaagggtcacggc
ggctgcgggcgctaccagccgcgcatccgacgctcgggcttggagctgtacgccgagtgg
aagcacgtcaacgaggattcccaggagaagaaaatcctgctgagtcccgaacgcgtccac
gagatcttcaagcgcatctcggacgaagaagacatcatcttgggcatggaccccaagttc
gcccgtccagagtggatgattgtgaccgtgctgccggtgcctccgctggccgtgaggccc
gccgtggtcatgcagggctcagctcgcaaccaggacgatttgacccacaagctggcggac
attgtgaagatcaacaaccagttgagaagaaacgagcaaagcggcgcagctgctcacgtc
atcgccgaggatgtgaagctccttcagtttcacgtggccacgatggtcgacaatgaattg
ccaggactgccgagggcgatgcaaaagtctggccggcctctcaaatccataaagcagcgt
ctaaagggaaaagaggggcgagtgaggggtaacctgatgggcaaacgcgtggacttctcg
gcccgaaccgtcatcacccctgaccccaacctgcagatcgaccaagtgggcgtgccacga
tccatcgcggccaacatgacgttccccgagatcgtcacaccctttaatatcgacagattg
caagagttggtccggcgaggcaacagccagtaccctggagcaaagtacattatccgagac
aacggagacagaatcgacctgcgattccaccctaaaccaagtgaccttcatctgcaaatc
ggctacaaggtggaaaggcacatgtgcgacggtgacatcatcatcttcaaccgacagccc
acgctgcataaaatgtccatgatggggcacagagttcggatcctgccttggtcgacgttc
cgactcaacctcagcgtcaccaccccttacaatgccgacttcgacggggacgagatgaac
ctccacctcccccagtcgctggagacgagggcggagattcaggagctggccatggtgccg
cggatgatcgtcacgccccagtccaaccggcccgtcatggggatcgtgcaggacaccctc
acagccgtccgcaagttcactaaaagagacgtgttcttggagaggggtgaggtgatgaac
ctcctgatgttcctgtccacctgggacgggaagatgcctcagccggcgatcctcaaaccc
cgtccgctgtggacggggaagcagatcttcagcctcatcattccaggacacatcaacgtg
atccgcacccacagcacgcaccccgacgacgaggacagcggcccgtacaaacacatctcc
cccggcgacaccaaggtcatagtggagaacggggagttgatcatgggcatcctgtgcaag
aagtctctgggaacctcggccggctccctcgtccacatctcctacctggagatgggccac
gacatcaccaggctcttctactccaacattcagacggtggtcaacaactggctgctcatc
gagggtcattccattggtattggagactccattgctgatgccaagacgtacctcgacatc
cagaacaccatcaagaaggccaaacaggatgtgatagaagttattgaaaaagcccacaac
aacgagctggagccgacacctggtaacaccctgaggcaaaccttcgagaaccaggtgaac
cgcatcctgaacgacgcccgtgacaaaacgggatcctctgctcagaagtcgctgtccgag
tacaacaacttcaagtccatggtggtggccggctccaagggctcaaagatcaacatctcg
caggttatcgccgtggtgggccagcagaacgtggagggtaagcgaatccccttcgggttc
aagcaccgcacgctgcctcacttcatcaaggacgactacggccccgagagccgaggcttc
gtggagaactcctacctggccgggctgacgccgaccgagttcttcttccacgccatggga
ggcagagagggtctgatcgacacggctgtcaagaccgccgagacgggttacattcagcgt
cgtctgatcaaatccatggagtctgtgatggtgaagtacgacgccacggtgcgaaactcc
atcaaccaggtggttcaactgcgttacggcgaggacggcctggcgggagagaacgtcgag
ttccaaaacctggcgacgttgaaaccctccaacaaggcgttcgaaaagaagtttcggttt
gactgcaccaacgagcgcgcgttgagaagggtgctgcaggaagacgtggtgaaagacgtg
ctgactaacgcacacgtgcagagcgtcttggagaaggagtttgagaagatgagggaggac
agggagatcctgcgggcgattttccccactggtgacagtaaggtggtgctgccgtgcaac
ctggccagaatgatctggaatgctcagaagatcttccgaatcaacactcgaaccccaaca
gacctaaatcccctgcgagtggttgagggcgttcatgagctgagtaagaagctggttatt
gtcaatggcgatgatcctctgagcaggcaggcccaggagaatgccactctgctcttcaac
atccacctgcggtcgacgctctgctccaaacgcatgacggaggagttccgcctgtccacc
gaggcttacgactggctgctgggagagatagagaccaagttcaaccaatccattgcccac
cctggtgaaatggtcggcgctctagctgcccagtcgctgggagagccggccacccagatg
accctgaacactttccactacgccggagtgtcggccaagaacgtcacgctcggtgtgcct
cgtctcaaagagttgatcaacatctcgaagaggcccaagacgccatcgctgactgtcttc
ctgctgggtcaggcggcacgtgacgcggagagggctaaggacatcctgtgtcgactggag
catacgacgctcagaaaggtgactgccaacaccgccatctactacgaccccaaccctcag
aacaccgtggtggccgaggatcaggagtgggtgaacgtctactacgagatgccggacttt
gacgtgactcgcatctcgccgtggctgctgcgcatcgagctcgaccgcaagcacatgact
gaccgcaaactgaccatggagcagatcgcagagaagatcaatgcaggtttcggtgacgac
ctcaactgcatcttcaacgatgacaacgctgaaaaactggtgctgcgaattcgcatcatg
aacagcgacgagaacaagtttcaagaggacgaggaggtcgtggacaaaatggacgacgat
gtgttcctgaggtgcatcgagtccaacatgctgacggacatgactctgcagggcatcgag
cagatcagcaaggtgtacatgcatctgcctcagaccgacaacaagaagaagatcatcatc
acggaggacggagagttcaaggccctgcaggagtggatccttgagacggacggagtgagc
ctcatgagggtgctcagtgagaaggacgtggatcctgtcaggaccacctccaacgacatc
gtggagatcttcacggttttgggtatcgaagctgtccgaaaagctctggagagagagttg
taccacgtcatctcctttgatggctcctacgtcaactaccgccacttggctctgctttgt
gacactatgacctgccgcggtcacctgatggccatcacacgtcatggcatcaaccgtcaa
gacaccgggcctctcatgaagtgttcctttgaggagacggtggatgtcctgatggaggcg
tcctctcacggagagtgcgacccgatgaagggcgtgtcggagaacatcatgctcggccag
ctcgccccagcagggaccggctgctttgacctgctgctggatgctgagaagtgcaagtac
ggcatggagatcccgacaaacatccccggcatcagcgtggcggggcccactggaatgttc
ttcggctcggtgccgagccccatgagcggtatgtctcccgccatgacaccctggaacacc
ggagccaccccagcgtacggagcatggtcccccagtgttggaagcggcatgacccctgga
gcagcaggtttctctcccagcgcagcgtcagacgcgagcggcttctctccaggttactcc
ccagcctggtctcccacaccagggtcaccggggtctcctggaccagtcagtccatacatc
ccatctccaggtggagccatgtcaccaaactactctcccacctcccctgcctacgagcct
cgttctccggggggctacacccctcagagcccaggctactccccaacgtcgccttcctac
tcccccacctctccctcttactcccccaccagccccaactacagccccacgtctccatcg
tactcccctacttcgcccagttactccccgacatctccctcctactctccgacgtctcca
tcttactccccgacgtctccctcctactcccccacttctccctcgtactccccgacgtct
ccgtcatattctccgacctctccgagctacagcccaacatcgccgagctacagcccgacg
tcgcccagctactcccctacttcaccctcctactcgccaacctcaccctcttactctccc
acttctccatcctactcccccacctccccttcctactcccctacctctccgtcctactct
ccgaccagtccgagctacagccccacatcgccgaactacaccccaacttcccccagttac
tcccctacctccccttcatactctcccacatcgccctcttactccccaacctcccccaac
tacacaccaaccagtccaaactactccccaacttcaccctcttattcccctacatctcca
tcctactccccctccagtccacgctacacccctcagtcgcccacttacacacccagctcg
ccgtcatacagccccagctctccatcatactccccaacctcgcccaaatacaccccgacg
tccccctcgtacagccccagctctccagagtacacccccacctctccgaaatactccccg
acgtcgccaaagtactcgcctacatcaccgaagtactcccccacctcccctacctactcc
ccaacaactccgaaatacagccccacctcccccacctacagcccggccatcagccccgac
gacagcgacgaggaaaacaactga
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integrated database retrieval system
