Candidatus Planktophila dulcis: A1s21155_04430
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Entry
A1s21155_04430 CDS
T05051
Name
(GenBank) endonuclease VIII
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
plak
Candidatus Planktophila dulcis
Brite
KEGG Orthology (KO) [BR:
plak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
plak03009
]
A1s21155_04430
Enzymes [BR:
plak01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
A1s21155_04430
Ribosome biogenesis [BR:
plak03009
]
Prokaryotic type
ribosomal protein modification factors
A1s21155_04430
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
DUF3079
Motif
Other DBs
NCBI-ProteinID:
ASY12198
UniProt:
A0AAD0E5L5
LinkDB
All DBs
Position
complement(869257..870639)
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AA seq
460 aa
AA seq
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MSRTVAIVTMGCARNEVDSEELAGRLAADGWTLVEDVESAEVAVVNTCGFIESAKKDSVD
ALLEANSLKGHGVTRAVVAVGCMAERYGKELAEALPEADAILGFDDYQDISVRLQSIVSG
NAHTPHVPRDRRALLPIAPVERAAARDESYASSLGAGGSLFRKRLGNAPWAPLKIASGCD
RRCSFCAIPYFRGSFISRRPTEILQEGAWLAQNGVSELFLVSENTTSYGKDLGDLKLMEK
ILHEFAEIEGVERVRLSYLQPAEMRPSLLQAMIETDKVAPYFDLSFQHTSPTVLRRMRRF
GDSEKFLHLISQIRALSPEAGIRSNFIVGFPGETQADYDDLADFITAAKLDAVGIFGYSD
EDNTEALDLSDKVEEEVIRERVEALSSLADEMVSLRAQARIGESVRVLIEDAELQEGRAA
HQGPEVDGTTTFIGTNFEVGQYIDAVVIDSMGADLVAQVQ
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgcaccgtcgctattgtcactatggggtgcgcgcgcaatgaagtagattccgaa
gagcttgctggccgattagcagccgatggctggacacttgttgaagatgttgaatcagca
gaagttgctgtggttaatacctgtggatttattgaatcagcaaagaaagattcagttgat
gccctccttgaagctaattccctaaaaggccatggggtaactcgcgcagtagttgctgtg
ggatgcatggctgagcgctatggaaaagagttagcagaagcgctacctgaggctgatgca
atcctaggctttgatgactatcaagatatttcagtgcgacttcaatcaattgtcagcggt
aatgcacacacaccacatgttccacgtgatcgtcgcgccttgcttcctattgcaccggta
gagcgcgctgctgctcgcgatgagagttatgcatcatccctgggtgctggtggctcactc
tttcgtaagcgcttaggaaatgccccgtgggcacccctgaagattgcatcaggctgcgat
cgcagatgttcattctgtgcaatcccatatttccgtggatcattcatctcacgacgtccg
actgaaatcttgcaggaaggggcatggcttgcacaaaatggcgtgagcgaactcttctta
gtcagcgaaaatacaacttcctatggcaaagacttaggtgatctcaaattgatggagaag
atccttcatgagtttgcagagatcgaaggcgtggagagagtcagactttcctatctacag
ccagctgaaatgcgcccatcgctgcttcaagcaatgatcgagacagataaggtcgcgccc
tactttgatctctccttccagcacacaagccccaccgtcttacgtcgcatgcgacgcttt
ggtgactctgagaaattccttcatctgatctcacaaattcgcgcactctctcctgaggca
ggaattcgttctaattttattgttggttttccgggggagacgcaagctgattatgacgac
cttgcagatttcatcacggcagcaaagcttgatgctgttggcatatttggttactcggat
gaggacaacacagaggctctcgatctcagcgataaagttgaggaagaagtcattcgtgaa
agagttgaagcactttcatcccttgcagatgaaatggtttcacttcgcgcccaggctcgc
attggtgaatcagtacgagtgctgattgaggatgctgaactacaagaaggtcgagctgcc
catcaaggccctgaagtcgatggaacaactacctttattggcactaattttgaggtaggc
caatatattgatgctgtggttatcgactcaatgggcgcagatttggttgcgcaagtgcaa
tga
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