KEGG   Candidatus Planktophila dulcis: A1s21155_06695
Entry
A1s21155_06695    CDS       T05051                                 
Name
(GenBank) RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase
  KO
K13821  RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
Organism
plak  Candidatus Planktophila dulcis
Pathway
plak00250  Alanine, aspartate and glutamate metabolism
plak00330  Arginine and proline metabolism
plak01100  Metabolic pathways
plak01110  Biosynthesis of secondary metabolites
Module
plak_M00970  Proline degradation, proline => glutamate
Brite
KEGG Orthology (KO) [BR:plak00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    A1s21155_06695
   00330 Arginine and proline metabolism
    A1s21155_06695
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:plak03000]
    A1s21155_06695
Enzymes [BR:plak01000]
 1. Oxidoreductases
  1.2  Acting on the aldehyde or oxo group of donors
   1.2.1  With NAD+ or NADP+ as acceptor
    1.2.1.88  L-glutamate gamma-semialdehyde dehydrogenase
     A1s21155_06695
  1.5  Acting on the CH-NH group of donors
   1.5.5  With a quinone or similar compound as acceptor
    1.5.5.2  proline dehydrogenase
     A1s21155_06695
Transcription factors [BR:plak03000]
 Prokaryotic type
  Ribbon-helix-helix
   Other families
    A1s21155_06695
SSDB
Motif
Pfam: Aldedh Pro_dh PEP-utilisers_N
Other DBs
NCBI-ProteinID: ASY12602
LinkDB
Position
complement(1291136..1294465)
AA seq 1109 aa
MPSIFETDAALDKLAATAITRTKALMKESDKLRDRREKANRKRVARLFKDPEAIEATITL
TDEVMRISSVKSSSRIFRRAAKKASITGFGPLNGIGLHAIGVLSHVVPTPVVAAVHQRVR
ALSKDLILASEAEKLSKHMGKRSDKGIALNINVLGEAVLGNHEAELRFQSILEMMRRPEV
NYISVKLSSIVAQLIIIDVEGSITRVSEKMRILYRQAQQHAVFVNLDMEEYRDLPMTVAA
FMRVLDEAEFESMKAGIVLQAYLPEAHQFFGDLVQWSQKRYARSGGSIKVRLVKGANLAM
ERAEAELHGWSPAPYRTKSDVDASYVRLIDAALRPEHSKAVRIGIASHNLFHMTWAIEVA
KSRGVLDQIDIEMLEGMANAEALAVTRAGQPVLLYAPVTRKDDFAAAVAYLVRRLDENTS
DENYLKAAFEISKNPKKFKEQEERFLTSISERHTITTESLRHVEHLTNTSTTFENERNAD
PTEPNFISAVSKAIKKVRAIKDQEIPLVIKGKEVFTKEQEEGTDPSDNGKVWYHYSVGST
KDVDTAIATAKKAQEKWSALSIQERTDILFKAADVMAKATTETIAVMSRDAGKTVAEADP
EVAEAIDFARFYATTAQNFGESTPLGTILVIPPWNFPYAIPMGGVCAALAAGNTVILKPA
PETVATAWEIVSHLWAGGVPQEVLQFLPMRDDEDGKYLVTNPGIDGVILTGSFDTASLFT
SWRPEINLMAETSGKNAVLISACADIDAAVKDLVQSAFGHAGQKCSAASIAIVDTHIYND
PAFVRQLKDAVESLHVGAGWDFSTTVGPIIRPSENALTRALTQLDAGETWLVEPKQLDEA
GLMWRPGVKFGVKAKSWSHRNEWFGPVLAVIEAPDFDTAITWQNETDFGLTAGIQSLDEK
ECEEWINRIEAGNLYVNRGITGAIVNRQPFGGWKRSAVGPNAKAGGLNYVNTLRNWPRVT
NVEAAIFGVNTWWAKVGSQAIDRSGLIVEKNFQRYRHYLAPIVVVVDESTTQDEKSLIHY
ISEKTGAKVIFTTDLRDVKEKYARIRWLASSKPPIYEEMLKGISVDHRPIAQRGDIETPR
WLLEQSVAITYHRYGNPNGGPKPACSGLT
NT seq 3330 nt   +upstreamnt  +downstreamnt
atgccctcaatttttgagacagatgcagccttagacaagctagcagccactgcaatcacg
cgcactaaagctctgatgaaagagtcagataagttgcgcgatcgtcgcgagaaagccaac
cgcaagcgggttgctcgactctttaaagatcctgaggcaattgaagcaaccatcactctg
accgatgaagtgatgcgtatttcatctgtgaaatcttcctcacgtattttccgtcgggct
gcaaagaaggcaagcatcaccggctttggcccactcaacggtattggccttcatgcaatc
ggagttctttcacatgtagtgccaacacctgtagttgctgccgtgcaccagagagtgcgc
gctctttcaaaagatttaattcttgcatcagaggcagagaaactttcaaagcatatgggt
aaacgcagcgataaaggcatcgcactaaacatcaacgttttaggtgaagccgtccttggt
aatcatgaagcagagcttcgcttccaatctattctggagatgatgcgccgcccagaagta
aattacatttcagtaaaactctcatccattgttgctcaactcatcatcatcgatgttgaa
ggttcaataactcgcgtttcagagaagatgcgcattctctatcgccaagcacaacagcat
gcagtattcgttaacctggatatggaggagtatcgcgaccttccgatgacggttgcagca
ttcatgcgcgtgctggatgaagcagagtttgaatcgatgaaggccggaattgttctgcag
gcatacctacctgaagcgcatcaattctttggcgatctcgtgcaatggtcgcagaagcgt
tatgcacgcagcggtggatccatcaaggtgcgcttagtaaaaggtgcaaaccttgcaatg
gagcgtgctgaagcagaacttcatggatggagccctgcgccctatcgaacaaagtcagat
gttgatgcttcttacgtgcgcctgatcgatgcagctctgcggcctgaacattcaaaggct
gtgcgcatcggcattgcatcccacaacctatttcacatgacatgggcgattgaagtcgcg
aaatctcgtggtgtcctagatcaaatagatattgaaatgcttgaaggtatggcaaatgct
gaagcacttgctgtgactcgtgcaggtcagcccgttcttctctatgcgccggtgactcgt
aaagatgattttgccgcagctgtcgcctatcttgttcgtcgcctcgatgagaacacatcg
gatgagaactatttgaaggctgcatttgaaatctcgaagaacccaaagaagtttaaggaa
caagaagagcgtttccttacctcgatttcagagcgtcacacaattacaactgagtccctt
cgccatgtggagcatctgacaaatacttcaacaacctttgagaatgaacgcaatgctgat
ccgactgaacctaacttcattagcgccgtctccaaggcaatcaaaaaggtccgtgcgatt
aaggatcaagaaattccattagtaattaaagggaaagaagtatttaccaaggagcaagaa
gagggaactgatccatccgataatggcaaagtttggtatcactactcagttggttcgact
aaagatgttgatacagcgattgccacagccaaaaaagcacaagagaagtggagcgcactc
tcaatacaggagcgcacagatattctcttcaaggcagctgatgtgatggcgaaggcaaca
acagagacaattgctgtgatgtctcgcgatgcaggaaagacagtggccgaagcagatcct
gaagttgcggaggcaatcgactttgcgcgtttctatgcaaccacagcgcaaaactttggt
gaatcaactccccttggaaccattcttgttattccaccatggaactttccttatgcgatt
ccaatgggcggagtgtgtgctgcccttgccgcaggaaatactgtcattctcaaacctgca
ccagagactgttgccacagcgtgggagattgttagccatctgtgggctggcggagtgcca
caagaggttctgcagttcttgccgatgcgcgatgatgaagatggaaagtatcttgtaacc
aatccaggaattgatggcgtaatccttaccggatcctttgataccgcatcactctttact
tcttggcgtcctgaaatcaatttgatggctgagaccagcggaaagaatgcagtccttatc
tcagcgtgtgctgatatcgatgcagcagtcaaagatttagtgcaatcagcatttggacac
gcaggacagaagtgctctgccgcatcgattgcaatcgttgatacccatatctataacgac
ccagcattcgttcgtcagctcaaagatgctgtggaatcactgcatgtgggagcaggatgg
gatttctcaacaacagtaggccccatcattcgtccctcagagaacgcactgacacgagca
cttacacagcttgatgcaggtgaaacttggcttgttgaaccaaagcaattagatgaggca
ggacttatgtggcgcccaggtgtgaagtttggagtgaaagcaaagtcttggtcacatcgc
aatgaatggtttggtccagtacttgctgtcattgaagcaccagattttgatacagcaatt
acttggcagaacgaaacagatttcgggttaacagctggaattcaatcactcgatgagaaa
gagtgcgaagagtggatcaatcgcattgaggctggaaacctttatgtgaaccgcggaatt
actggggcgattgttaatcgccaaccatttggtggatggaagcgctctgctgttggacct
aacgctaaagctggtggacttaactacgtcaacacacttcgcaactggccgcgagtgacg
aatgtggaagctgcaatctttggtgtgaacacatggtgggcaaaagttggttcacaagca
atcgatcgaagtggtctcattgttgagaagaatttccagcgttatcgtcattacttagcg
ccaattgttgttgtagtcgatgaatcaacgacacaagatgaaaagtcactgattcattac
atctctgaaaaaactggagcaaaggttattttcacaactgacttaagggatgtgaaagag
aaatatgctcgcattcgctggcttgcttcaagtaagccacccatttatgaggagatgctc
aaaggcatttcggtagatcatcgccctattgcgcaacgtggagatatcgaaactcctcga
tggttgctcgagcaatcagttgcaatcacctatcaccgttatggcaatcccaacgggggg
cctaagccagcatgttcagggcttacctaa

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