Pseudomonas lalkuanensis: FXN65_21685
Help
Entry
FXN65_21685 CDS
T07120
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
plal
Pseudomonas lalkuanensis
Brite
KEGG Orthology (KO) [BR:
plal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
plal03009
]
FXN65_21685 (rimO)
Enzymes [BR:
plal01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
FXN65_21685 (rimO)
Ribosome biogenesis [BR:
plal03009
]
Prokaryotic type
ribosomal protein modification factors
FXN65_21685 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QEY64545
UniProt:
A0A5J6QSI5
LinkDB
All DBs
Position
4696313..4697635
Genome browser
AA seq
440 aa
AA seq
DB search
MSTATPKVGFVSLGCPKATVDSERILTQLRMEGYEIVPTYQDADVVVVNTCGFIDSAKAE
SLDAIGEAIAENGKVIVTGCMGVSEDSIRDVHPSVLAVTGPQQYEQVVNAVHEVIPPKAD
HDPFVDLVPPQGIKLTPRHYAYLKISEGCNHSCSFCIIPSMRGKLVSRPVGDVLSEAERL
VKAGVKELLVISQDTSAYGVDLKYKLDFWNGQPVKTRMLELCEALSAMGVWVRLHYVYPY
PNVDDVIPLMAEGKLLPYLDIPFQHASPKVLKSMKRPAFEDKTLARIKKWREICPDLTIR
STFIVGFPGETEEDFQYLLDWLTEAQLDRVGCFQYSPVEGAPANDLGLELVPDDVKQDRW
ERFMAHQQAISTARLQLKIGREMDVLIDEVDDEGAVARSWADAPEIDGSVFIESTSVKPG
DKVRVRIVDADEYDMWAELV
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccgccacccccaaagtcggattcgtcagcctgggttgcccgaaggccaccgtc
gactccgaacgcatccttacccagctgcgcatggaaggctacgaaatcgtaccgacctac
caggatgccgacgtggtcgtggtcaacacctgtggtttcatcgacagcgccaaggctgaa
tccctggatgccatcggcgaagccatcgccgaaaacggcaaggtgatcgtcaccggctgc
atgggcgtttccgaagattccatccgcgacgtacacccgagcgtgctggccgtgaccggc
ccgcagcagtacgagcaggtggtgaacgccgttcacgaggtcattcctcccaaggccgac
cacgaccccttcgtcgacctggtcccgccgcagggcatcaagctgaccccgcgtcattac
gcctacctgaagatttccgaaggctgcaaccacagctgcagcttctgcatcatcccgtcc
atgcgcggcaagctggtcagccgtccggtgggcgatgtgctctccgaggccgagcgcctg
gtcaaggccggcgtgaaggagctgctggtgatctcccaggacaccagcgcctacggcgtc
gacctcaagtacaagctggacttctggaacggccagccggtgaagacccgtatgctggaa
ctgtgcgaagccctctccgccatgggcgtgtgggtgcgcctgcactacgtctacccctac
cccaacgtggatgacgtgatcccgctgatggccgaaggcaagctgctgccctacctggac
atccccttccagcacgccagcccgaaagtgctcaagtccatgaagcgcccggccttcgag
gacaagaccctggcccgcatcaagaagtggcgcgagatctgcccggacctgaccatccgc
tccaccttcatcgtcggcttccccggcgagaccgaagaagacttccagtacctgctggac
tggctgaccgaagcccagctggaccgtgtcggctgcttccagtactcgccggtagagggc
gccccggccaacgacctgggcctggagcttgtgcccgacgacgtgaagcaggaccgctgg
gagcgcttcatggcgcaccagcaggccatctccaccgcccgcctgcaactgaagatcggt
cgcgaaatggacgtgctgatcgacgaagtggacgacgaaggcgctgtggcccgctcctgg
gcggacgcgccggaaatcgacggcagcgtgttcatcgagtccaccagtgtgaagccaggc
gacaaggtgcgcgtgcgcatcgtggatgccgacgaatacgacatgtgggccgagctggtc
tga
DBGET
integrated database retrieval system
