Candidatus Planktophila lacus: A1s21148_04575
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Entry
A1s21148_04575 CDS
T05050
Name
(GenBank) endonuclease VIII
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
plan
Candidatus Planktophila lacus
Brite
KEGG Orthology (KO) [BR:
plan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
plan03009
]
A1s21148_04575
Enzymes [BR:
plan01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
A1s21148_04575
Ribosome biogenesis [BR:
plan03009
]
Prokaryotic type
ribosomal protein modification factors
A1s21148_04575
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
DUF3079
Motif
Other DBs
NCBI-ProteinID:
ASY10785
UniProt:
A0AAC9YRH9
LinkDB
All DBs
Position
complement(910027..911421)
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AA seq
464 aa
AA seq
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MSRTVAIVTMGCARNEVDSEELAGRLAADGWTLVSEVEDAEVAVVNTCGFIESAKKDSID
ALLEANSLKGHGTTRAVVAVGCMAERYGQELAKALPEADGILGFDDYQDISARLQSIVSG
NAHTPHVPRDRRSLLPIAPADRPAARQEAIDESYASSLGAGGSLFRKRLGNAPWAPLKIA
SGCDRRCSFCAIPYFRGSFISRKPTEIIEEGKWLAKNGVTELFLVSENTTSYGKDLGDLK
LMEKILPDFAAIEGIERVRLSYLQPAEMRPSLLQAMIENEKIAPYFDLSFQHTSPTVLRR
MRRFGDSEKFLHLIAQIRALSPEAGIRSNFIVGFPGETQEDYDDLANFISAAKLDAIGIF
GYSDEDNTEALDLTDKVAEEVIRERVEALSSLADEMVSMRAAARIGENVRVLIEDEELQE
GRAAHQGPEVDGTTSFIGTGFKVGQYIDAVVIESMGADLVARAL
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgagtcggacagttgcaatagtcaccatgggctgcgcccgtaatgaagtcgactccgaa
gaacttgctggccgtttagcagccgatggctggactctggttagcgaagttgaagatgcc
gaagtcgccgttgtaaatacctgtggctttatagaatctgcaaagaaagattcaatcgat
gccttgcttgaggctaattcgctaaaaggccacggaaccacgcgcgcggttgtcgccgtt
ggatgtatggccgagcggtacggacaagagttagcaaaggcgttacctgaagccgacggt
attttgggcttcgatgattaccaagatatttcagcccgcttgcaatcaattgtttctgga
aatgctcatacgccacatgttccacgagatcgcagatcgttactgcctattgctccagct
gatcgcccagctgcacgtcaagaagccattgatgagtcttatgcatcttcactcggcgca
ggcggttcgctctttcgtaaacgtttaggtaacgctccatgggcgccgctaaagattgcc
tccggttgtgatcgtcgttgttcattctgtgcgattccttatttccgcggttcatttatc
tcacgcaagccaaccgagatcatagaagaaggaaaatggctcgccaagaacggggtcact
gagctcttcttggtaagtgaaaatacgacttcatatggaaaagatctcggtgatctaaag
ttaatggagaagatacttcctgactttgctgcgatcgagggcatcgagagagttcgcctt
tcctatctgcagccagccgagatgcgcccatcgttgctacaggcaatgatcgaaaatgaa
aaaattgcgccatattttgatctctcattccagcacaccagccctacagtcttgcgtcgc
atgcgccgctttggagattctgaaaaattcttacatttgattgctcagatcagagcgcta
tctcctgaagcaggtattcgctctaacttcatcgttggctttccgggggagacgcaagaa
gattatgacgatcttgcaaacttcattagcgccgctaaattagatgcgatcggcatcttt
ggctactctgatgaagacaatactgaggcccttgatctcacagataaagttgccgaagaa
gttatccgcgaacgcgttgaggctttatcttcattggctgatgagatggtttccatgcgc
gcagcagcccgtattggcgagaatgtgcgcgtccttattgaagatgaagagctacaagaa
ggtcgcgccgcacaccaaggccctgaagtagatggcacaacctcatttatcggaactggc
tttaaggtcgggcaatacattgatgccgtggttatcgaatccatgggcgcagatttggtg
gcgcgtgcgctgtga
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