Palleronia sp. LCG004: RVY76_09830
Help
Entry
RVY76_09830 CDS
T09465
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
plcg
Palleronia sp. LCG004
Pathway
plcg00190
Oxidative phosphorylation
plcg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
plcg00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
RVY76_09830
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RVY76_09830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plcg03019
]
RVY76_09830
Enzymes [BR:
plcg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
RVY76_09830
Messenger RNA biogenesis [BR:
plcg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
RVY76_09830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
Motif
Other DBs
NCBI-ProteinID:
WOI55344
LinkDB
All DBs
Position
2011425..2013602
Genome browser
AA seq
725 aa
AA seq
DB search
MTIADFLSAPLPAPSEPPEGEDYSGPDRFFNRELSWLAFNWRVLEEAENLRVPLLERLRF
LAISASNMDEFYTVRVAGLRELAHAGNTTPAADGRTPAEQLRLINSDARELLAHQQNVYR
TLCREMSAEGIHILSIEDLRPEDESFLDEVFLSSVFPILSPLAIDPAHPFPFIPNTGYSF
ALQLERDSDKRILRALLPIPSQIERFIRLPAPEGQHRFLPLEDLLLTHLGSLYPGYRIKG
HCTFRVLRDSDLEVEDDAEDLVREFEVALKRRRRGEVVRLTISAGAPNGLKRVIMSELPV
RDDEVVEVDGIIGVAALSELVLSDRPDLLWPIFTPRVPERVQDHDGDMFAAIRQKDMLLH
HPYETFDMVIRFLAQAANDPQVVAIKQTLYRTSYDSPIVDALCEAAEQGKSVTALVELKA
RFDEAANIRQSRKLERAGVHVVYGFLNLKTHAKISTVVRREGDRMATYSHFGTGNYHHIT
ARIYTDLSLFTCDSALGRDGTRLFNYLSGYAQPQALENLSISPMDLKSTVIKRIAEEAEH
AQAGRPAKIWGKMNALIETDVIDALYAASQAGVEISLVVRGICGLKPGIKGLSENIRVKS
IVGRFLEHSRIVCFGNGHDLPSKRARVYISSADWMGRNLNRRVETLVECTNPTVKAQIVS
QIMAANLADEAQSWVLRPDGTFVRPAGDEGQRLFNCHRFFMENPSLSGRGSAGASDVPEL
THSDD
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcgcagacttcctgagcgccccgcttcccgccccgtccgaaccgcccgaaggc
gaggattattccggacccgaccgtttcttcaatcgcgaactgagctggctcgccttcaac
tggcgcgtgctggaagaggccgagaacctgcgggtgccgctcttggaacgtctgcggttc
ctcgccatctcggccagcaacatggacgaattctacaccgtccgcgtcgcgggtctgcgc
gagctcgcccatgccggcaacaccacgcccgccgccgacggccggacaccggcagagcag
cttcgcctcatcaattccgatgcgcgcgaactgctcgcgcatcagcagaacgtctatcgc
accctctgccgcgagatgtctgccgaaggcatccacatcctgtcgatcgaggatctccgc
cccgaggacgagagcttcctcgacgaggtcttcctgtcgagcgtcttcccgattctctcg
ccgctcgccatcgacccggcgcatcccttccccttcattcccaacacaggctattccttc
gcgctgcagctcgagcgtgattcggacaagcgtattctccgcgcgctcctcccgatcccc
agccagatcgagcggttcatccgcctgcccgcgcccgagggtcagcatcggttcctgccg
ctcgaggatctgctgctcacgcacctgggctccctctatccgggctacaggatcaagggg
cactgcaccttccgcgtgctgcgcgacagcgatctcgaggtcgaggacgatgccgaggat
ctcgtgcgggaattcgaggtcgcgctcaagcggcggcgccgcggcgaggtggtgcgcctg
acgatcagcgcgggcgcacccaacgggctcaagcgcgtcatcatgtcggaactgcccgtt
cgcgacgacgaggtcgtcgaggtcgacggcatcatcggtgtcgcggcactgtccgagctc
gtcctgtcggaccggcccgatctgctctggccgatcttcacgccgcgcgtccccgagagg
gtgcaggatcacgacggcgacatgttcgcggcgattcgccagaaggacatgctgctccac
cacccctacgagaccttcgacatggtgatccgcttcctcgcgcaggcggcgaacgatccg
caggtcgtggcgatcaagcagacgctctatcgcacctcctacgacagcccgatcgtcgat
gcgctctgcgaggcggccgaacagggcaagtccgtcacggccctggtcgaactcaaggcc
cggttcgacgaggcggcgaatatccggcagtcacgcaagctcgaacgggcgggcgtgcat
gtggtctacggcttcctgaacctcaagacccacgccaagatcagcaccgtcgtccggcgc
gagggcgacaggatggcgacctattcgcatttcgggacgggcaactaccaccacatcacc
gcgcggatctataccgacctgtcgctcttcacctgcgattcggccctcgggcgggacggc
acgcggctattcaactacctgtccggctatgcgcagccgcaggcgctcgagaacctttcg
atctcgccgatggacctgaaatcgacggtcatcaagcgaattgccgaggaagccgagcat
gcccaggcgggccggccggccaagatctggggcaagatgaacgccctgatcgaaaccgac
gtgatcgacgccctctacgccgcctcgcaggcgggggtcgagatcagcctggtggtgcgc
ggcatctgcgggctcaagcccggcatcaagggcctgtccgagaatatccgcgtgaaatcg
atcgtcggccgtttcctcgaacacagccggatcgtgtgcttcggcaacggccacgacctg
ccgtcgaagcgcgcgcgggtctatatctccagcgccgactggatgggccgcaacctcaac
cgccgggtcgagacgctggtggaatgcaccaatccgaccgtcaaggcgcagatcgtgtcg
cagatcatggcggccaatctcgccgacgaggcgcagagctgggtgctccggcccgacggg
acattcgtccgccccgcgggcgacgaggggcagcggctcttcaactgccaccgtttcttc
atggaaaacccctctctgtcgggtcgcggctccgcaggtgccagcgatgttccggagctt
acccattccgacgattga
DBGET
integrated database retrieval system
