Pleionea sp. HL-JVS1: Q9312_12970
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Entry
Q9312_12970 CDS
T09336
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
plei
Pleionea sp. HL-JVS1
Brite
KEGG Orthology (KO) [BR:
plei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
plei03009
]
Q9312_12970 (rimO)
Enzymes [BR:
plei01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
Q9312_12970 (rimO)
Ribosome biogenesis [BR:
plei03009
]
Prokaryotic type
ribosomal protein modification factors
Q9312_12970 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
NTPase_1
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
WMS86131
UniProt:
A0AA51RR89
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Position
complement(2884642..2885949)
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AA seq
435 aa
AA seq
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MSKSPPSVGFVSLGCPKNTVDSERIMTQLRAEGYQLSNSYHNSDLVVVNTCGFIDAAVQE
SLDAIGDALNENGKVIVTGCLGIKEDTIREVHPNVLAVTGPHAYDEVLSQIHQQLPPMHD
PFMDLVPPAGLKLTPEHYAYLKISEGCNHNCTFCIIPSMRGKLVSRDIGSVLQEAENLVN
NGVRELLVVSQDTSAYGIDVKYKTGFWGGSPVKTRFKELCQELGKMDAWVRLHYVYPYPH
VDEVIPLMAEGLILPYLDIPFQHASQRVLKNMKRPAASEKVLTRIKQWREICPEIAIRST
FIVGFPDETEDDFKQLIDFLYEAQLDRAGAFKYSPVDGATANSLPNHVDPDVQQQRWETF
MAVQQEISSSKLQSKVGTRQEVLIDEITDSGATGRSRFDAPEIDGLVHITTDEKLEKGDL
VEVTIQSADDYDLYA
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaatcaccaccaagcgtcggctttgtatctttgggctgtccgaaaaataccgta
gactcagaaagaatcatgacgcagctgagagcagagggttatcagttatccaatagttac
cacaattccgacttagtggtggtaaacacctgtggcttcatcgatgccgcagtacaagag
tcattagatgccattggcgatgcgttaaatgaaaacggaaaagtaattgtcacgggttgc
ctcgggattaaagaagatactattcgtgaagtgcacccaaatgtactcgcggttaccgga
cctcatgcctatgatgaagtgctttctcaaatccatcagcagcttcctccaatgcatgat
ccctttatggatctagttccgccagccgggttaaaactaacccctgagcactatgcttat
ttaaaaatttcagaaggatgcaaccataattgcaccttttgtatcattccatcgatgcgt
gggaaactcgttagtcgagatataggcagcgtattgcaagaagctgaaaatctcgtaaac
aatggtgttcgcgaattgctagtcgttagtcaagacacaagtgcctatggaattgatgta
aagtataaaactggcttctggggtggatctccggtaaaaactcgcttcaaagaattgtgc
caagagttaggaaaaatggatgcatgggtacgtttacattatgtatatccttaccctcat
gttgacgaagttattccgttaatggcagaaggattaatcctcccttacctcgacatacct
tttcaacatgccagccaacgtgttttaaaaaatatgaaaagaccagcggcaagtgaaaag
gtactgactcgaataaaacaatggcgagaaatttgtcctgaaatagcaatccgtagcacc
tttattgtaggttttccggatgaaacagaagatgatttcaagcaactcatcgacttctta
tacgaagctcaactcgatcgtgcgggtgcttttaaatattcccccgtggatggcgcaacg
gcaaatagcttacctaatcatgtcgatcccgacgttcaacaacaacgctgggaaacattc
atggccgttcaacaagaaataagttctagcaaattgcaatcaaaagtagggacacgacaa
gaagtattgatcgatgaaattactgactcaggcgcgactggacgaagccgtttcgatgct
cctgaaattgatgggctggttcatattacaacggatgaaaaactagagaaaggcgactta
gtcgaagttaccatacagtcagccgacgattacgatttatatgcttag
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