Pleomorphomonas sp. SM30: OHA_1_00949
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Entry
OHA_1_00949 CDS
T05766
Symbol
rimO_1
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pleo
Pleomorphomonas sp. SM30
Brite
KEGG Orthology (KO) [BR:
pleo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pleo03009
]
OHA_1_00949 (rimO_1)
Enzymes [BR:
pleo01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
OHA_1_00949 (rimO_1)
Ribosome biogenesis [BR:
pleo03009
]
Prokaryotic type
ribosomal protein modification factors
OHA_1_00949 (rimO_1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
TRAM
Motif
Other DBs
NCBI-ProteinID:
BBE71375
LinkDB
All DBs
Position
1:1040353..1041705
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AA seq
450 aa
AA seq
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MTDTSPAATTGDDARSPKISFVSLGCPKALVDSERIVTHLRSEGYEIARRHDGADVVIIN
TCGFLDSAKAESLQAIGTAMKENGRVIVTGCMGAEPEQIRESFPNVLAITGPQAYESVMA
AVHEAVPPKHDPFVDLVPPQGVKLTPRHYAYLKISEGCNNRCTFCIIPKLRGDLVSRPVV
DVLREAERLVKAGVRELLVISQDTSAYGVDLKYQSGMWKDREVRAKFLDLSEALGEFGVW
VRMHYVYPYPHVDDVIPLMADGRILPYLDIPFQHAAPSVLKAMRRPAHQEKTLERIRKWR
EICPDLAIRSTFIVGFPGETDADFEELLAFMTEAKLERVGCFKYEPVDGATANDLGLPAV
PDDVKERRWHRFMAHQQAISAKLLQRRVGKRIQVLVDDSAGTAAKGRSQWDAPEIDGAVH
LTSRRPIRAGEFVTVKIDRADAYDLHGTVA
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacacctcccccgccgcgaccaccggcgacgatgcccgttcccccaagatctcc
ttcgtcagcctcggctgcccgaaggcgctggtcgacagcgagcggatcgtgacgcacctg
cgctcggagggctacgagatcgcccgccggcacgacggcgccgacgtcgtcatcatcaac
acctgcggcttcctcgacagcgccaaggccgagagcctgcaggcgatcggcacggcgatg
aaggagaacggccgcgtcatcgtcaccggctgcatgggcgccgagcccgagcagatccgc
gagagcttcccgaacgtgctcgccatcaccgggccgcaggcctacgagagcgtgatggcg
gccgtgcacgaggcggtgccgccgaagcacgaccccttcgtcgacctcgtgccgccgcaa
ggcgtcaagctgacgccgcgccactacgcctatctcaagatttcagagggctgcaacaat
cgctgcaccttctgcatcatccccaagctgcgcggcgacctcgtctcgcgaccggtggtc
gacgtactgcgcgaggccgagcggctggtaaaggccggcgtacgggaactcctggtgatc
agccaggacacttcggcctacggcgtcgacctcaagtaccagtccggcatgtggaaggac
cgcgaggtccgcgccaagttcctcgacctgtccgaggcgctcggcgaattcggggtgtgg
gtgcgcatgcactacgtctacccctacccgcacgtcgacgacgtcatcccgctgatggcc
gacggacggatcctgccctacctcgacatcccgttccagcacgccgcgccgtcggtgctg
aaggcgatgcgccggccggcgcaccaggagaagacgctggaacggatccgcaagtggcgc
gagatctgtcccgacctcgcgatccgctcgaccttcatcgtcggcttccccggcgagacc
gacgcggacttcgaggaactgctcgccttcatgaccgaggcgaagctggaacgggtcggc
tgcttcaagtacgagccggtcgacggcgccaccgccaacgacctcggtcttccggcggtg
ccggacgacgtcaaggaacgccgctggcaccgcttcatggcgcaccagcaggcgatctcg
gccaagctgctgcagcgccgcgtcggcaagcgcatccaggttctggtcgacgacagcgcc
ggcaccgccgccaagggccgctcgcagtgggacgccccggagatcgacggcgccgtgcac
ctgacctcgcgccgcccgatccgcgccggcgagttcgtcaccgtcaagatcgaccgcgcc
gacgcctacgacctccacggcaccgtggcctga
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