Phaethon lepturus (White-tailed tropicbird): 104625483
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Entry
104625483 CDS
T08325
Symbol
CLP1
Name
(RefSeq) LOW QUALITY PROTEIN: polyribonucleotide 5'-hydroxyl-kinase Clp1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
plet
Phaethon lepturus (White-tailed tropicbird)
Pathway
plet03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
plet00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104625483 (CLP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plet03019
]
104625483 (CLP1)
Enzymes [BR:
plet01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
104625483 (CLP1)
Messenger RNA biogenesis [BR:
plet03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
104625483 (CLP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
Clp1
Motif
Other DBs
NCBI-GeneID:
104625483
NCBI-ProteinID:
XP_010291423
LinkDB
All DBs
Position
Unknown
AA seq
295 aa
AA seq
DB search
STVCRLLLNYAVRLGRRPTFVELDVGQGSVSIPGTMGALYIERPADVEEGFSLQAPLVYH
FGSTTPGTNIKLYNKITSRLADVFNQRCEVNRRASVSGCVINTCGWVKGSGYQALVHAAS
AFEVDVVVVLDQERLYNELKRDLPHFVRTVLLPKSGGVVERSKDFRRECRDDRIREYFYG
FRGCFYPHAFDVKFSDVKIYKVGAPTIPDSCLPLGMSQEDNQLKLVPVTPGRDMVHHLLS
VXSPDDNISETSVAGFIVVTGVDLERQVFTVLSPAPRPLPKNFLLIMDIRFMDLK
NT seq
890 nt
NT seq
+upstream
nt +downstream
nt
agtcgaccgtgtgccgcctgctgctgaactacgctgtgcgcctggggcgccggcccacct
ttgtggagctggacgtgggccagggctccgtctccatccccggcaccatgggcgctctct
acatcgagcggccggccgacgtggaggagggcttttccctccaggcccctctcgtctacc
acttcggctccaccacacctggcaccaacatcaagctctacaataagatcacatcccgcc
tggccgacgtcttcaaccagcgctgcgaagtgaaccgccgtgcctcggtgagcggctgcg
tcatcaacacctgcggctgggtgaagggctcgggctaccaggcgctagtgcacgccgcct
cggccttcgaggtggacgtggtggtggtgctggaccaggagcggctctacaatgagctga
agagggacctgccccactttgtgcgcaccgtcctgctccccaagtccggcggggtggtgg
agcgctccaaggacttccggcgggagtgccgagacgaccgcatccgggagtatttctatg
gcttccggggctgcttctaccctcacgccttcgacgtcaagttctccgacgtcaagatct
acaaggtgggagctcccaccatcccggactcctgcctgcccctgggcatgtcgcaggagg
acaaccagctgaagctggtgccggtgacgccggggcgggacatggtgcaccacctcctga
gcgtcnagagccccgacgacaacatctcggagaccagcgtggctggtttcatcgttgtta
ctggcgtcgacctggagcgccaggtcttcaccgttctctcccctgcccctcggcccctgc
ccaagaacttccttctcatcatggacattcgcttcatggacctgaagtag
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