Phaethon lepturus (White-tailed tropicbird): 104626296
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Entry
104626296 CDS
T08325
Symbol
POLR1B
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
plet
Phaethon lepturus (White-tailed tropicbird)
Pathway
plet03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
plet00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
104626296 (POLR1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plet03021
]
104626296 (POLR1B)
Enzymes [BR:
plet01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
104626296 (POLR1B)
Transcription machinery [BR:
plet03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
104626296 (POLR1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
PBP_GOBP
Motif
Other DBs
NCBI-GeneID:
104626296
NCBI-ProteinID:
XP_010292488
LinkDB
All DBs
Position
Unknown
AA seq
1011 aa
AA seq
DB search
MPQGTIKQPLGYIPIMVKSKLCNLYNLSPQELIQHHEEEEEMGGYFIINGLEKVIRMLIM
PRRNFPLAMTRHKWKNRGPGFTEYGVVMHCVKDEHTAINMNLHYLENGCVMVNFIFQKEL
FFLPLGFALKALVNFPDYQIFEELVKEKEGDTFYVNCITEMMRAVVDAGCFTQQNVLEYL
GKSFRIKLSLPEWYSNEQAADFILNKCICIHLTNRTEKFYLLCMMTRKLYAFAKGECMED
NPDSLMNQEVLTPGQLFLMFLKERLESWLQSVKFVLEKRTEKADIGINADSLVKAFSLAT
DFTKPFEYLLATGNLRSKTGLGMLQDSGLCVVGDKLNFIRYLSHFRCIHRGAAFSQMRTT
TVRKLLPESWGFLCPVDTPDGEPCGLMNHMTALCEVVTEMVPVTDIPPLLCSLGVTPIDA
TPSKPYAECYRVVLDGSVVGWVERELAPEIAETLRRFKITQEKRFPARAEVVLIPMTGKP
SLYPGLFIFTTPCRMVRPVRNLFYGRNEWIGTLEQIFMNVASLESEVVPGMTTHQELFPH
SILSVVANLIPFSDHNQSPRNMYQCQMGKQTMGFPVYNYKDRSDNKLYHLHTPQSPLVRP
SMYDYYGMDSYPIGTNSIVAVISYSGYDMEDAMIVNRSSWQRGFAYGSVIKMESIDLSLK
ASRAGDNLVFGIRPGDPNIMEKLDADGLPFVGSILQPGDPFYSFMNLNTGETFTVYYPNK
EVGIVDNVRLCSNDRGTGKFKKACITVRVPRNPTVGDKFASRHGQKGILSQLWPVEDMPF
TENGMVPDILFNPHGFPSRMTIGMLIESMAGKSAALHGVSYDATPFTFTEKNSALKYFGE
TLVSAGYNFFGTEKMYSGISGLELEAEIFVGVVYYQRLRHMVSDKFQVRTTGPRDAVTNQ
PIKGRNVEGGIRFGEMERDALLAHGTSFLLQDRLFNCSDGSIAYVCMSCGSMTSPVLEKP
PHSSSVTSNRRYSCSVCSEVDTIEVVPVPHVFRYFVAELAAMNIKTKLKVE
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atgccacaggggactattaaacagcccctggggtatattccaatcatggtgaagtccaag
ttgtgcaacctctataatctttctccacaagagctcatacagcaccatgaggaggaagag
gaaatgggaggctactttataattaatggcttagaaaaagttattaggatgctgattatg
cccaggcgaaatttccctcttgcaatgacaagacacaaatggaaaaacagaggccctggt
ttcacagagtacggagtagtgatgcattgtgttaaggatgagcacactgcaataaacatg
aaccttcactacttggaaaatggttgtgtcatggtgaatttcatttttcagaaagagttg
ttcttccttcccttgggatttgcgctgaaggcattagttaatttcccagactaccagatt
tttgaagagttggtcaaagaaaaggaaggcgacaccttttatgtgaactgcattacagag
atgatgagagcagtagtggatgcaggctgttttacacagcaaaatgtcctcgaatacctg
ggaaagagcttcagaataaaacttagccttcctgagtggtacagcaatgaacaggctgca
gatttcattttgaacaagtgtatctgcatacatctgacaaacagaactgaaaagttctac
ctgctctgtatgatgacccggaagctgtatgcttttgccaaaggggagtgcatggaggat
aatccagacagtctgatgaatcaagaagtgcttaccccaggacagcttttccttatgttc
ttaaaggagaggcttgaaagctggttacaatctgttaagttcgttttggagaaaagaaca
gaaaaggcagatatcggcataaatgcagacagcttggtgaaggcattcagcctggcaaca
gactttaccaagccgtttgaatatcttcttgcaactggtaacctgcgatctaaaaccggc
ctgggcatgttacaggacagtggtctgtgtgtggtgggagacaagctgaatttcattcgc
tacctttcgcactttcgctgcatacacagaggagcagcattttcccagatgagaactaca
actgtccgcaagcttctgcccgaatcctgggggttcctgtgccctgtggacaccccagat
ggagaaccctgtggtctgatgaaccacatgacagctctgtgtgaagtagtgacagagatg
gtgcctgtgacagatattccacctttgttatgttccctaggtgtcacccccattgatgcg
actccaagcaagccttatgcggagtgttacagagttgtgttggatggctctgtggtgggc
tgggtagagagggagctggctcctgagattgcagaaaccctccgccgtttcaagataaca
caagagaagagatttcctgcacgggcagaagtggtccttatcccaatgacaggaaaaccc
agtctgtatcctgggttgttcatttttactaccccttgccggatggtgcggcctgtcaga
aacctgttctatggaagaaatgagtggattggtactctggaacagatcttcatgaacgtg
gcctcgctggagtcagaggtggtgcccggaatgaccactcaccaggagctcttccctcac
agcattctgagtgtggtggccaacctcatccccttctccgaccacaatcaaagtccacga
aacatgtaccagtgccagatgggaaagcaaaccatggggtttccagtttataactacaag
gaccgctcagataataagctgtaccaccttcacactccccagagccctctggtgcggccc
agcatgtatgactattatggtatggacagctatccaattggcaccaattcaattgtggct
gtcatctcctacagcggctatgacatggaagatgcaatgattgtgaacagatcttcctgg
cagagagggtttgcctatggaagcgttatcaagatggagagcattgacctttcccttaaa
gccagcagggcaggcgataatttagtatttggcatcaggcctggtgatccaaacattatg
gagaagttggatgctgatggactgccttttgttggctctatcctacagccgggggacccc
ttctacagcttcatgaacctcaacacaggggagaccttcactgtgtattatccgaataag
gaagtcggcattgtagacaacgtcaggttatgcagtaatgaccgtggcactgggaagttc
aagaaggcttgcatcactgtgagggttccccgaaatccaactgttggagacaaatttgcc
agccgtcatggacagaaaggtatcctgagccagctctggccagttgaggatatgccgttc
acggagaatgggatggttccagacatcctcttcaaccctcacggatttccctcccgtatg
accattgggatgttaatcgagagcatggcggggaagtcagcagcgctgcacggtgtctcc
tatgatgccactcccttcaccttcacagagaagaactccgctttgaaatactttggtgag
actttagtgagtgcaggttataacttctttgggacggaaaagatgtacagtggcatcagc
ggcctggagctggaggcggagatctttgtgggagtggtgtactatcagcgcctgcgccac
atggtgtcggacaagttccaggtgaggacaacggggcctcgagacgctgtcaccaaccag
cccatcaaggggaggaatgtggaaggtgggattcgcttcggtgagatggagcgtgacgct
ttgctggctcatggcacatctttcttgctacaagaccgcctgttcaactgctccgatggc
tccatagcctatgtctgcatgagctgtggcagcatgacatctcctgtgctggagaaaccg
ccgcattcctcctctgtgacaagcaacaggaggtactcctgctctgtctgtagtgaggtg
gacacaatcgaggttgtccctgtgccccatgtcttccgttactttgtcgcagagctggca
gccatgaacataaaaacaaagcttaaggtggagtag
DBGET
integrated database retrieval system
