Peromyscus leucopus (white-footed mouse): 114691324
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Entry
114691324 CDS
T07241
Symbol
Prdm9
Name
(RefSeq) histone-lysine N-methyltransferase PRDM9
KO
K20796
[histone H3]-lysine4 N-trimethyltransferase PRDM7/9 [EC:
2.1.1.354
]
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu00310
Lysine degradation
pleu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
114691324 (Prdm9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pleu03000
]
114691324 (Prdm9)
03036 Chromosome and associated proteins [BR:
pleu03036
]
114691324 (Prdm9)
Enzymes [BR:
pleu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
114691324 (Prdm9)
Transcription factors [BR:
pleu03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
114691324 (Prdm9)
Chromosome and associated proteins [BR:
pleu03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
114691324 (Prdm9)
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
114691324 (Prdm9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
PRDM2_PR
zf-C2H2
zf-C2H2_4
SSXRD
PHF5
zf-C2H2_5
Zn_ribbon_SprT
KRAB
SET
Zn-ribbon_8
zf_PR_Knuckle
GrpE
Siah-Interact_N
Motif
Other DBs
NCBI-GeneID:
114691324
NCBI-ProteinID:
XP_028722407
LinkDB
All DBs
Position
8a:complement(56604265..56633182)
Genome browser
AA seq
826 aa
AA seq
DB search
MSCTMSTNKLEENSPEGDAGRLEWKPKVKDEFKDISMYFSKEEWAEMGEWEKIRYRNVKR
NYKMLISIGLRAPRPAFMCYQRQRIKPQIDDSEDSDEEWTPKQQGSPSWVPFRVKHTKQQ
KGAPRMSSNNESNVEEVSGMENLLNTSGSEHPQKPVFSPGEGNASGQHSGQKPKLRKKNV
EVKMYSLRERKGLAYKEVSEPQDDDYLYCEKCQNFFINSCPNHGPPIFIKDSMVERGHPN
HSVLSLPHGLRIGSSGIPEAGLGVWNEASDLPVGLHFGPYKGQITEDEEAANSGYSWLIT
KGRNCYEYVNGQDESQANWMRYVNCARDDEEQNLVAFQYHRQIFYRTCRVIRPGCELLVW
YGDEYGQELGIQWGSKRKNGFTTGKELRTEIHPCLLCSLAFSNPKFLSLHMQWNHRTQIF
SRASSRINSKPGDPHPDQLQEQQHLDSYNESDKARSQECKGKSKPMHKWTREKISTAFLS
TLKEQIRSEESKKTMEEALRTGQKTNTKDTVKSLIGSEISRIETECGQRFSDKSNANESQ
RTHSEEKPYVCRECGQGFTRKSYLICHQRTHTGEKPYVCRECGQGFTWKSVLICHQRTHT
GEKPYVCRECGQGFIQKSDLIRHQRTHTGEKPYVCRECGQGFTQKSVLICHQRTHTGEKP
YVCRECGQGFTWKSHLIRHQRTHTGEKPYVCRECGQGFTRKSYLICHQRTHTGEKPYVCR
ECGQGFIRKSVLICHQRTHTGEKPYVCRECGQGFTWKSVLICHQRTHTGEKPYVCRECGQ
GFTWKSVLIRHQRTHTAEKPYLFKKDEKTNSNKTTPQQSQEDNCSL
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgtcctgcaccatgagcaccaacaagctggaagagaatagtccagagggagatgcaggg
agacttgagtggaagcccaaggtcaaagatgagttcaaagatatttccatgtacttctcc
aaagaagaatgggcagagatgggagagtgggagaaaattcgctataggaacgtgaaaagg
aactataaaatgctgatttctataggtctcagagcccctaggccagctttcatgtgttac
caaaggcaacgaatcaagccccagatagatgacagtgaggattctgatgaagaatggaca
cctaagcagcaaggtagtccttcttgggtgcctttcagagtgaagcacactaaacaacag
aagggagcacctagaatgtcctcaaataatgaatctaatgtggaagaagtgtctggaatg
gaaaatttgctgaatacaagtggctcagaacacccccagaaaccagtgttctctcccgga
gaaggaaatgcctcgggacagcactctggacaaaaaccaaaactcaggaaaaagaatgtt
gaagtgaagatgtacagtttgcgagagagaaagggccttgcatataaagaggtcagcgag
ccccaggatgatgactatctctattgtgagaagtgccagaatttcttcatcaacagttgt
cccaatcatgggcctcctatattcataaaagacagtatggtggaaagagggcatcccaac
cactcagtcctcagtctgcctcatggactgagaattggttcatcaggcatccctgaggct
ggacttggagtatggaatgaagcctctgacctgccagtgggtctgcactttggcccctat
aaaggccagatcacagaggatgaagaggcagccaacagtggatactcctggctgatcacc
aaggggagaaactgctatgagtatgtcaatgggcaggatgagtcccaagccaactggatg
aggtatgtgaactgtgcccgggatgatgaggagcagaatctggtggcttttcaatatcac
agacagatcttctatcgaacctgtcgggtcatcagaccaggttgtgagcttctggtctgg
tatggggatgagtacggccaggaactgggcattcagtggggaagcaagaggaagaatgga
ttcacaacaggaaaagaattaaggacagagatccatccgtgtcttttgtgctctttggcc
ttctcaaatccaaaattccttagtctacatatgcaatggaatcatcgaactcaaatcttc
tcaagagcatcttcaaggataaactccaaaccaggggatcctcatccagatcaacttcag
gaacagcaacatttggattcatacaatgaaagtgacaaggccagaagtcaagagtgcaaa
ggaaagtccaaacccatgcataaatggacaagagagaagatttcaacagcctttctcagc
acactcaaagaacaaattagatctgaggaaagtaagaaaactatggaagaagcactcaga
acaggccagaaaacaaatacaaaggacacagtcaaatcacttattggatcagaaatctca
agaattgaaacagaatgtggacaacgtttcagtgataagtcaaatgccaatgagagccag
aggacacattcagaggagaagccctatgtttgcagggagtgtgggcagggctttacacgg
aagtcatacctcatctgtcaccagaggacacacacaggggagaagccctatgtttgcagg
gagtgtgggcagggctttacatggaagtcagtcctcatctgtcaccagaggacacacaca
ggggagaagccctatgtttgcagggagtgtgggcagggctttatacagaagtcagacctc
atcaggcaccagaggacacacacaggggagaagccctatgtttgcagggagtgtgggcag
ggctttacacagaagtcagtcctcatctgtcaccagaggacacacacaggggagaagccc
tatgtttgcagggagtgtgggcagggctttacatggaagtcacacctcatcaggcaccag
aggacacacacaggggagaagccctatgtttgtagggagtgtgggcagggctttacacgg
aagtcatacctcatctgtcaccagaggacacacacaggggagaagccctatgtttgcagg
gagtgtgggcagggctttatacggaagtcagtcctcatctgtcaccagaggacacacaca
ggggagaagccctatgtttgcagggagtgtgggcagggctttacatggaagtcagtcctc
atctgtcaccagaggacacacacaggggagaagccctatgtttgcagggagtgtgggcag
ggctttacatggaagtcagtcctcatcaggcaccagaggacacacacagcggagaagccc
tatcttttcaagaaggatgagaaaaccaatagcaataaaaccacacctcaacaatcacag
gaagacaactgtagcctttaa
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integrated database retrieval system
