Peromyscus leucopus (white-footed mouse): 114691461
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Entry
114691461 CDS
T07241
Symbol
Slc6a4
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu04721
Synaptic vesicle cycle
pleu04726
Serotonergic synapse
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09150 Organismal Systems
09156 Nervous system
04726 Serotonergic synapse
114691461 (Slc6a4)
04721 Synaptic vesicle cycle
114691461 (Slc6a4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pleu02000
]
114691461 (Slc6a4)
Transporters [BR:
pleu02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
114691461 (Slc6a4)
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Gene cluster
GFIT
Motif
Pfam:
SNF
5HT_transport_N
Motif
Other DBs
NCBI-GeneID:
114691461
NCBI-ProteinID:
XP_028722631
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Position
8b:60273602..60308627
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AA seq
631 aa
AA seq
DB search
METTPLNSQKGLSACKDREDCQENGVLQKGVPTPGDRAEPGQISNGYSAVPSMSAGDEAT
HSLPAATTTTLVAEIRQGERETWGKKMDFLLSVIGYAVDLGNIWRFPYICYQNGGGAFLL
PYTIMAIFGGIPLFYMELALGQYHRNGCISIWRKICPIFKGIGYAICIIAFYIASYYNTI
IAWALYYLISSFTDQLPWTSCQNPWNTANCTNYFSQDNITWTLHSTSPAEEFYLRHVLQI
HLSKGLQDLGTVSWQLALCIMLIFTIIYFSIWKGVKTSGKVVWVTATFPYVVLSVLLVRG
ATLPGAWRGVVFYLKPNWQKLLETGVWVDAAAQIFFSLGPGFGVLLAFASYNKFNNNCYQ
DALVTSVVNCMTSFLSGFVIFTVLGYMAEMRNEDVSEVAKDAGPSLLFITYAEAIANMPA
ATFFAIIFFLMLITLGLDSTFAGLEGVITAVLDEFPHIWAKRREWFVLIVVITCVLGSLL
TLTSGGAYVVTLLEEYATGPAVLTVALIEAVAVSWFYGITQFCSDVKEMLGFSPGWFWRI
CWVAISPLFLLFIICSFLMSPPQLRLFQYNYPHWSIVLGYCIGTSSIICIPTYIIYRLIS
TPGTLKERIIKSITPETPTEIPCGDIRLNAV
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggagaccacacccttgaattctcagaaagggctgtcagcgtgcaaggacagagaggac
tgtcaagaaaatggtgttctccagaagggcgtccccaccccaggggacagggcagagcct
ggtcaaatatccaatgggtactcggcagttcccagcatgagcgcaggagacgaagctaca
cactctctgccagctgccaccaccaccaccctggtggctgagattcgccaaggggaacga
gagacctggggcaagaagatggattttctcctgtctgtcattggctacgctgtggacctg
ggcaacatttggcgttttccctacatttgctatcagaatggcggaggggccttcctcctc
ccctataccatcatggccatctttggggggatcccgctcttttacatggagctcgcactg
ggccagtaccaccgaaatgggtgcatttctatatggaggaaaatctgcccgattttcaaa
gggattggctacgccatctgcatcattgccttctacatcgcctcctactacaacaccatc
attgcctgggcgctctactacctcatctcctccttcacggaccagctgccctggaccagc
tgccagaacccctggaacaccgccaactgcaccaactacttctcccaggacaacatcacc
tggacgctccattccacgtcccctgctgaggagttttacctgcgccatgtcctgcagatc
cacctgtcgaagggactccaggacctggggaccgtcagctggcagcttgctctctgtatc
atgctcatcttcaccattatctactttagcatctggaaaggagtcaaaacatctggcaag
gtggtgtgggtgacagccaccttcccttacgtcgttctgtccgtcctgctggtgagggga
gccacccttcctggagcctggagaggggtcgtcttctacttgaaacccaactggcagaaa
ctcttggagacaggggtgtgggtggatgctgctgctcagatcttcttctctcttggcccg
ggctttggggttctcctggcttttgctagctacaacaagttcaacaacaactgctaccaa
gacgccctggtgaccagtgtggtgaactgcatgaccagcttcctctcgggctttgtcatc
ttcacggtgcttggctacatggctgagatgaggaatgaggacgtgtcggaggtggccaaa
gacgcgggtcccagcctcctcttcatcacatatgccgaggctatagccaacatgccagca
gccacattctttgccatcatcttcttcctcatgctcatcactctgggtttggatagcacg
tttgcaggcctggaaggcgtgataacggcagtactggatgagtttccacacatctgggcc
aagcgtcgcgagtggtttgtgctcattgtggtcattacttgcgtcttgggatccctgctc
acactgacttctggcggcgcgtatgtggtgacgctgctggaggagtatgccaccggcccc
gccgtgctcactgtggcgctcatagaagccgttgctgtgtcttggttctatggtatcact
cagttctgcagtgacgtgaaggaaatgctcggcttcagcccaggatggttctggaggatc
tgctgggtagctatcagtcctctgtttctcctgttcatcatttgcagttttttgatgagc
ccaccccaactgcggcttttccaatataattatcctcactggagtatcgtcttgggctac
tgcatagggacgtcatctatcatctgcatccctacgtatatcatttatcggctgatcagc
actccagggacacttaaggagcgcattattaaaagtatcactcccgagacaccaacagaa
attccctgtggggacatccgcttgaatgctgtgtag
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