Peromyscus leucopus (white-footed mouse): 114699285
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Entry
114699285 CDS
T07241
Symbol
Brip1
Name
(RefSeq) Fanconi anemia group J protein
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu03440
Homologous recombination
pleu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
114699285 (Brip1)
03460 Fanconi anemia pathway
114699285 (Brip1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pleu03400
]
114699285 (Brip1)
Enzymes [BR:
pleu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
114699285 (Brip1)
DNA repair and recombination proteins [BR:
pleu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
114699285 (Brip1)
FA (Fanconi anemia) pathway
Downstream FA components
114699285 (Brip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
DEAD
ResIII
Motif
Other DBs
NCBI-GeneID:
114699285
NCBI-ProteinID:
XP_028734124
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All DBs
Position
8b:complement(69491424..69635018)
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AA seq
1177 aa
AA seq
DB search
MSSSMSSEYTIGGVKINFPCKAYPAQLAMMSSIVRGLNSSQHCLLESPTGSGKSLALLCS
ALAWQQSHIGKPVDEGLNKKPEVPSSCCCTCHSKNFTHSDMSTGTSPHFSSPSKLSERNG
TSSPCRDSPEKNTLAAKLSAKKLASVQRDEDDDFQIEKKRIRPLETAQQMRKRHCLEKDV
HHLDAEVASEKRVKPESPVRKTSSSFQNLDGPCSRCCCSTKQGHSEDSANTLKKDHGGQS
KRPKIYFGTRTHKQIAQITRELRKTAYSGVPMTVLSSRDHTCVHPEVVGNFNRNEKCMEL
LDGKQGKSCYFYHGVHKISNQQTLQSLQGMSKAWDIEELVSLGRKLKACPYYTARELIDD
ADIIFCPYNYLLDAQIRESMDIKLKEQVIILDEAHNIEECARESASYSVTEVQLRFARDE
LDSLVNSNVRKKSHEPLRDVCYNLINWLETNSEHLVERDYESSCKIWSGNEMLLNLYRMG
ITNATFPVLQRHFSAVLQKEEKVTSVHGKEEAIQIPIISASTQIMLKGLFMVLDYLFREN
SRFADDYKIAIQQTYSWTNQIAVFDKNGVLAVPKNKKHSRQKIGVNVLNFWCLNPAVAFS
DINNKVRTIVLTSGTLSPMRSFSSELGVTFNIQLEANHVVSNSQVWVGTVGSGPQGRNLC
ATFQHTETFEFQDELGMLLLSVCQTVSQGILCFLPSYKLLEKLRDRWVSTGLWHSLESVK
TVIAEPQKGEKADFDELLQVYYDAIKFKGEKDGALLIAVCRGKVSEGLDFSDDNARAVVT
VGIPFPNVKDLQVELKRQYNDHHSKLRGLLPGRQWYEIQAYRALNQALGRCIRHKNDWGA
LILVDDRFNSNPNRYISGLSKWVRQQIQHHSTFASALESLTEFSERHQKVTNGAKKDKKC
MKDKESTLEVACLEESTLTSVSKASHLSAENSREEAAEVCVQEPQCPKMAARTPSVLGHA
ISSRKKSDPVLRGESVQTVKTERNVISRSSSPTFGKRTEPVSWPVFNSLRRHCTRKVQNC
APALLSSESHASGSSASKTEDKTALPLTGERVTSNEAAGASFAARPQSETVISSVKVDVT
PAKNHSSQLFCPEKDRHPDRDLPAGSEEAAKHASSNRATETEEAEEDESLCFTPELFDPV
DTDEEHGELVETDRSSNDSDCFSAEDLFETGTGFGQK
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcctcaatgtcatcggaatacactattggtggggtgaagattaactttccttgt
aaagcttatccagcacagcttgctatgatgagttctattgtcagggggctaaacagtagt
cagcattgtttgttggagagccccacagggagtggaaaaagtttagccttactttgttct
gcgttagcatggcaacaatctcatattggaaagccagtggatgagggcttaaataaaaag
cctgaggtgccatcatcatgttgttgcacatgccattcaaagaattttactcacagtgac
atgagcacgggcacgtcacctcatttcagtagtccaagcaagctgtctgaaagaaatggg
acttcgtcaccctgtcgagactctcctgaaaaaaatactctggctgcaaagttatctgcc
aagaaactggcatccgtacagagagatgaagatgatgattttcaaatagagaagaaaaga
atccgacccttggaaactgcacagcagatgagaaaacgtcattgcttggaaaaggatgtc
caccatctggatgcagaagtagcttcggaaaagagagtaaaacctgagtcacctgtaaga
aagacaagctcctctttccaaaatctcgatggcccgtgttctaggtgctgctgttctact
aagcaaggacacagtgaagactctgcaaacactctgaagaaagatcatgggggacaatcc
aagagacccaaaatttattttgggacccgcacacacaagcagattgctcagatcactaga
gagctccgaaagacagcttactcaggggtcccaatgactgttctttccagcagggatcat
acttgtgttcatcccgaagtagtgggcaacttcaacagaaatgaaaagtgcatggagcta
ctggatggaaaacagggaaaatcctgctatttttatcatggtgtccataaaattagtaat
cagcagacattgcagtctcttcaggggatgtccaaggcctgggacatagaagagcttgtc
agccttgggaggaaactgaaggcatgtccctactacacagctcgggagctgatagatgat
gctgacataatcttttgtccctataactacctcttggacgcacaaataagggaaagtatg
gatataaagctgaaggagcaagttatcattttagatgaagcgcataacattgaagagtgt
gctcgggaatcagcaagctacagtgtaacagaagttcagcttaggtttgcacgggatgag
ctagatagtttggtcaacagtaatgtaaggaagaaaagccatgagcccctacgagatgtg
tgctataacctcattaattggctagaaacaaattctgaacatcttgtagaaagggactat
gaatcgtcttgtaaaatttggagtggaaatgaaatgctcttaaatttgtacagaatgggc
attaccaatgctacttttcccgttttgcagagacatttttcagctgttcttcaaaaagaa
gaaaaagtcacatcagtccatggtaaagaggaagcaatacagatccctattattagtgct
tcaactcaaataatgctcaaaggactctttatggtgcttgactatctctttagagaaaat
agcagatttgcagatgattataaaattgctattcaacaaacttactcctggacaaatcag
attgctgtttttgataaaaatggggtcttggctgtaccaaaaaataagaaacattcacga
cagaagattggagttaatgtgctaaacttttggtgcttaaatccagctgtggccttttca
gatattaacaacaaagtacgaaccattgttctaacatcaggaacgctgtcacctatgaga
tccttttcatccgagctcggtgttacatttaacatccaactagaggctaaccatgtcgtc
agtaactcacaggtttgggttggtactgttggctcgggccctcagggtcggaatctctgt
gctaccttccagcataccgaaacattcgagttccaggatgaattgggaatgctgttgttg
tctgtgtgccagactgtgagccaagggattttgtgctttttgccatcttacaagctatta
gagaaattaagagaccgttgggtttccactggcttatggcatagtttggagtcagtgaag
acagtcatcgcagaaccgcaaaaaggagaaaaagctgattttgatgaattgctgcaggtg
tactatgatgccatcaagttcaaaggagaaaaagatggagcccttctcatagcggtttgc
cgtggcaaagtgagcgagggtctggacttctccgatgataatgcccgtgctgtcgtaaca
gtaggaattccttttccaaatgtgaaagatcttcaggttgaactaaaacgacagtacaat
gaccaccattcaaagttgagaggccttttgcctggccgtcagtggtatgaaattcaagca
tacagagccttaaatcaggctctaggcaggtgtattcgacacaaaaatgattggggagct
cttattctagtggatgatcgttttaatagcaacccaaatcgctacatatcggggctttct
aaatgggtgaggcagcagatccagcaccactcaacctttgcgagtgccctggagtccctg
accgagttttctgaaaggcaccagaaagttactaatggagccaaaaaagacaaaaagtgt
atgaaagacaaggagtctactctggaagtggcctgtttggaggagagcactcttacaagt
gtgtcaaaagcaagtcatctatcagcagaaaattctagggaagaagcagcagaagtgtgt
gtccaggagccgcagtgtccgaaaatggctgccagaaccccgtcagtactgggtcacgct
atctccagcaggaagaaaagtgatccagtgctaagaggagaatctgttcaaacagtgaaa
acagagagaaatgtcatttccagatcctccagccccactttcgggaagcgaacagaacca
gtcagctggcctgtctttaattctctgagacggcactgcactaggaaagtacagaattgc
gcacctgccctcctgtcttcagagagccacgcctctggttcttccgcctccaagacagaa
gacaaaaccgctttgcccctcacgggtgaacgtgtgacctccaacgaagcagctggggca
tcgttcgcagctcgccctcagtcagaaaccgtgatttcgtcagtgaaggttgacgtgact
cctgcgaagaaccattccagtcagctcttctgccctgagaaagatcgccatccggatagg
gacttgcctgccggaagtgaagaagcagccaagcatgccagttcaaatagagctacggaa
acagaagaagcagaggaagacgagtctctgtgtttcacaccggaactgtttgatcctgtt
gacaccgatgaagaacacggggaactagtggaaaccgatagatccagtaatgattcggat
tgtttctcagctgaagacctctttgaaacggggactgggttcgggcagaaatga
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integrated database retrieval system
