Peromyscus leucopus (white-footed mouse): 114707430
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Entry
114707430 CDS
T07241
Symbol
Vcam1
Name
(RefSeq) vascular cell adhesion protein 1
KO
K06527
vascular cell adhesion molecule 1
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu04064
NF-kappa B signaling pathway
pleu04514
Cell adhesion molecules
pleu04668
TNF signaling pathway
pleu04670
Leukocyte transendothelial migration
pleu04933
AGE-RAGE signaling pathway in diabetic complications
pleu05143
African trypanosomiasis
pleu05144
Malaria
pleu05417
Lipid and atherosclerosis
pleu05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
114707430 (Vcam1)
04668 TNF signaling pathway
114707430 (Vcam1)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
114707430 (Vcam1)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
114707430 (Vcam1)
09160 Human Diseases
09174 Infectious disease: parasitic
05144 Malaria
114707430 (Vcam1)
05143 African trypanosomiasis
114707430 (Vcam1)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
114707430 (Vcam1)
05418 Fluid shear stress and atherosclerosis
114707430 (Vcam1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
114707430 (Vcam1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
pleu04090
]
114707430 (Vcam1)
04091 Lectins [BR:
pleu04091
]
114707430 (Vcam1)
CD molecules [BR:
pleu04090
]
Proteins
114707430 (Vcam1)
Lectins [BR:
pleu04091
]
I-type lectins (Siglecs)
114707430 (Vcam1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
C2-set
Ig_2
V-set
C2-set_2
Ig_5
ICAM_N
ICAM1_3_5_D2
Ig_6
Adhes-Ig_like
Motif
Other DBs
NCBI-GeneID:
114707430
NCBI-ProteinID:
XP_028745998
LinkDB
All DBs
Position
6:complement(89842183..89861556)
Genome browser
AA seq
735 aa
AA seq
DB search
MPEKMVTISGASAVLWILFAASQAFNLEISPEHRMVAQIGESVSLTCTTTGCESPSFSWR
TQIDSPLNGKVRTEGSKSILTMDPVSFENEHAYLCTATCGSGKLERGIQVDVYSFQDLEI
QLSGPLEVGKPAMVKCLAPDVYPADSLEMDLLKGDHLLKTQLFVEEVKKSLVTKSLEVTF
TPVIEDIGKALVCRAKLYMDSEPTTRETVKELQVYTSPKNTVISVYPSRRLQEGGAVTMT
CSSEGLPAPEIFWSRKLDNGVLQPLSGNATLTLVAMRMEDSGIYVCEGVNLIGRNKTEVE
LIVQEKPFTVEIFPGSRVAAQVGDSVVLTCVAVGCDSPSFSWRTQIDSPLNGDVRSEGAK
STLTLSPVSFENEHSYLCTVTCARRKLEKGIQMEVYSFPKDPEIEMSGLLVHGRPVTVNC
TVPDVYPFDHLEIELLKGETVLMNKYFLEEMSMKSLETKSLEMTFIPTTEDTEKALVCLA
KLHSGEAESEPKQRQSTRTLYVNVAPKEVIISVSPSPILREGSPVSLTCSSDGLPAPKIL
WSRQLPNGGLQPLSEERMLVLTSTKMEDSGFYVCEGINQAGISKDSVELQIIQDSPKDIQ
LTAFPSQSVKEGDTVIISCTCGNVSQTWIILKKKGKTEDKVLKSVDGAYTILKAQPQDAG
VYECESKTEVGSQLRSLTLDVKGREMNKDYFSPELLALYCASSLVIPAVGMIIYFARKAN
MKGSYSLVEAQKSKV
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagaagatggtcacgatctctggagcctcagccgtactttggatactgtttgca
gcctctcaagcttttaatcttgagatctcccctgaacacagaatggtggctcagattggg
gaatccgtgtccctgacttgcaccaccacaggctgtgagtctccgtctttctcttggaga
acccagatagacagtccactgaacgggaaggtgaggacggaggggagcaagtccatcctg
accatggatcccgtcagttttgagaatgaacacgcttacctgtgtacagcaacttgtgga
tctgggaagctggagcgagggatccaggtggacgtctactcttttcaagatctggagatt
cagctgagtggccccctggaggtcgggaagcctgccatggtcaagtgtttggctcctgat
gtttatccggctgacagcttggagatggatctactcaaaggtgaccatctcctgaagacg
cagttgtttgtggaagaggtgaagaagtctctggtaaccaagagtttggaagtgaccttt
actcctgtcattgaggatattggaaaagctcttgtgtgccgagctaaattatacatggat
tctgaacccacaacaagggagactgtcaaagaactgcaagtctacacctctcccaagaat
acagttatctctgtatatccctccagaaggcttcaagagggtggtgccgtgacaatgaca
tgctccagtgagggtctaccagctccggagattttctggagcaggaaattagataatgga
gtgctacagcccctctcaggaaacgcaactctcaccttagtcgctatgagaatggaagat
tctggaatttatgtgtgcgaaggagttaatctgattgggagaaacaagacagaggtggaa
ttaattgtccaagagaaaccatttactgttgaaatcttccctggatcccgggtggctgca
caggttggagactcagttgtgctgacgtgtgttgctgttggctgtgactccccctctttt
tcttggagaacccagatagacagcccccttaatggggacgtgaggagtgagggggccaag
tccacgctgacactgagccctgtgagctttgagaatgaacactcttacctgtgcactgtg
acctgtgctcgaaggaaactggaaaagggaatccagatggaagtctactcattccctaaa
gacccagaaattgagatgagcgggctgcttgtgcatgggagacctgtcactgtaaactgc
acagtccctgacgtgtacccttttgaccatctggagatcgaattactcaagggagagacc
gtgctgatgaataaatattttttggaggaaatgagcatgaaatctctagagaccaaaagt
ttggaaatgaccttcatccctaccacggaagatactgagaaagctcttgtttgcctggct
aagttacacagtggcgaagcggaatctgaacccaaacaaaggcagagtacacggacactt
tatgtcaatgttgcacccaaggaagtcatcatctcggtcagcccctctcccatcctacgg
gagggcagtcctgtgagcttgacctgctcaagtgatggtttaccagctccaaaaatcctg
tggagcaggcagctccctaatgggggactgcagcctctttctgaagagagaatgctcgtc
ttaacatctacaaagatggaagattctggcttctatgtgtgtgaagggattaaccaggct
ggaattagcaaagattcggttgaacttcagattatccaagactctccaaaagatatacag
cttacagccttcccttcccagagcgtcaaagagggagacaccgtcattatttcctgcacg
tgcggcaatgtgtcccaaacatggataatcctgaagaagaaaggcaagacagaggacaag
gtgctgaagtcagttgacggtgcctacaccatccttaaggcccagccgcaggatgccggg
gtgtacgagtgcgaatcgaaaaccgaagttggctcgcagttaagaagtttaacccttgac
gtaaaaggaagagaaatgaacaaggactatttttctcccgaactacttgcactctactgt
gcctcctccttggtaatacctgctgtcgggatgatcatttacttcgcaagaaaagccaac
atgaaaggatcatacagtctggtggaagcacagaagtcgaaggtgtag
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