Peromyscus leucopus (white-footed mouse): 114709517
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Entry
114709517 CDS
T07241
Symbol
Polr1b
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
114709517 (Polr1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pleu03021
]
114709517 (Polr1b)
Enzymes [BR:
pleu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
114709517 (Polr1b)
Transcription machinery [BR:
pleu03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
114709517 (Polr1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
114709517
NCBI-ProteinID:
XP_028749229
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All DBs
Position
4:105216933..105244685
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AA seq
1135 aa
AA seq
DB search
MEVDGRWRSLPSGPSLKHLTDPSYATPPEQQKAALQDLTRAHVDSFNYAVLEGLSHAVQA
IPPFEFAFKDERISLTIVDAVISPPSVPKGTICKELSVYPAECRGRRSTYRGKLTADISW
AVNGVPKGIIKQFLGYVPIMVKSKLCNLYNLPPQALIEHHEEAEEMGGYFIINGIEKVIR
MLIMPRRNFPIAMVRPKWKGRGLGYTHFGISMHCVREEHSAVNMNLHYVENGTVMLNFIY
RKELFFLPLGFALKALVSFSDYQIFQELIKGKEEDSFFKNSVSQMLRIVMEEGCSTQKQV
LNYLGERFRVKLSLPDWYPNEEAAKFLFNECICIHLKSDTEKFYLLCLMTRKLFALARGE
CMEDNPDSLVNQEVLTPGQLFLMFLKEKMENWLVSIKIALDKRAQKTNVSINNENLLKIF
SMGSELTKPFEYLLATGNLRSKTGLGFLQDSGLCVVADKLNFIRYLSHFRCVHRGADFAK
MRTTTVRRLLPESWGFLCPVHTPDGAPCGLLNHLTAVCEVVTKCVYTASVPALLCGLGVT
PIDAAPCRPYSDCYPVLLDGVMVGWVDKELAPDVADALRRFKVLREKRIPPWMEVVLVPM
TGKPSLYPGLFLFTTPCRLVRPVQNLELGKEELIGTMEQLFMNVAIFEDEVFAGASTHQE
LFPHSLLSVIANFIPFSDHNQSPRNMYQCQMGKQTMGFPLLTYQDRSDNKLYRLQTPQSP
LVRPCMYDYYDMDNYPVGTNAIVAVISYTGYDMEDAMIVNKASWERGFAHGSVYKSEFID
LSEKFKQGDDSLVFGVKPGDPRVMQKLDSDGLPFIGAKLQFGDPYYSYLNLNTGEGFVVY
YKSKENCVVDNIKVCSNDTGSGKFKSICITIRVPRNPTIGDKFASRHGQKGILSRLWPAE
DMPFTESGMVPDILFNPHGFPSRMTIGMLIESMAGKSAALHGLCHDATPFVFSEESSALG
YFGEMLKAAGYNFYGTERLYSGISGMELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDK
VTNQPVGGRNVQGGIRFGEMERDALLAHGTSFLLHDRLFNCSDRSVAHVCVKCGSLLSPL
LEKPPPSWSAMRNRKYNCTVCGRSDTIDTVSVPYVFRYFVAELAAMNIKVKLDVI
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atggaagtcgacggccggtggcggagcctgcctagcgggccaagcctaaagcatttgacc
gacccttcgtacgcgactcctccggagcaacaaaaggcggcgttgcaggacctgacgcgg
gcgcacgtggactccttcaactacgcggtgctggaggggctgagccacgcggtgcaggcc
atacctccctttgaatttgctttcaaagatgagcgcatctctcttactattgtggacgct
gtcatcagtccgccgtcggtgcccaaagggaccatctgcaaagagctcagtgtttatcca
gccgagtgccggggccggaggagcacctaccgcgggaagctgacggccgacatcagctgg
gcagtgaatggcgtccccaaagggatcattaaacagtttcttggctatgttcccatcatg
gtcaagtctaagctttgcaacttgtacaaccttcctcctcaagccctcattgagcaccat
gaggaggcagaggaaatgggaggttattttataatcaatggcattgaaaaagtcatccga
atgttgattatgcctcggagaaatttccccatcgcgatggtaagaccaaagtggaaaggt
agagggcttggctacactcatttcgggatttcaatgcactgtgtgagagaagagcattct
gctgtcaatatgaaccttcactatgtggagaatggcacggtgatgttgaactttatttac
cggaaagagctgtttttccttcctttgggatttgcgcttaaggctcttgtgagcttttcc
gattatcagattttccaggagctcatcaaaggcaaagaggaagactctttctttaagaat
tctgtttctcagatgttgaggattgtgatggaagagggttgctccacgcagaagcaggtc
cttaactatctgggtgagcgcttcagagtgaagctcagtcttcccgactggtacccgaac
gaggaagcggccaagttcctgttcaatgagtgcatctgtatccacttgaaatccgatact
gagaagttttatctgctttgtcttatgacccggaagctctttgctttagccagaggagag
tgcatggaggacaaccctgatagtttagtgaatcaagaagtccttacacctggtcagctc
ttcctaatgtttctgaaggaaaaaatggaaaattggctagtgtctattaaaattgcttta
gataagagggctcagaagaccaacgtatccataaacaatgaaaatttgctgaagatattt
agtatgggatcagaactaacaaaaccatttgaatatcttcttgctactgggaatctgcgt
tcaaaaacaggtctcggcttcctgcaagattctggcctgtgtgttgtggctgacaagctg
aacttcattcgctatctctcccacttccgctgtgtgcacagaggggccgactttgctaag
atgaggaccaccacggtgcgcaggctgcttccagagtcctggggcttcctctgccctgtg
cacaccccagacggggcaccgtgtgggctgctgaaccacctgaccgccgtatgcgaggtc
gtcacgaagtgtgtgtacacggcgtctgttccagccttgctctgcggcttaggagtcacc
cctatcgacgcggcaccttgtcggccctacagtgactgctaccctgtcctgctggacggc
gtcatggtgggctgggtggacaaggagcttgctcctgacgtggcagacgctctccgtcgc
tttaaggtgttgagagaaaaaagaattcctccttggatggaggtggtcctggtccccatg
acaggaaaaccaagcctgtacccagggctgttcctcttcaccaccccctgcaggctggtg
aggcctgtgcagaacttggaactgggtaaagaagaactcattggaactatggaacagctc
ttcatgaacgtggccatttttgaggatgaggtttttgctggagcttccacacaccaggaa
ctcttccctcacagcctgctgagtgtgatcgccaacttcattcccttctccgatcataac
cagagtcctcggaacatgtaccagtgccagatgggtaaacagaccatgggcttcccactg
ctcacttatcaagaccgatcggataataaactctaccgtctccagacacctcaaagcccg
ctagtgagaccgtgcatgtatgactattatgacatggacaactatccagttgggacaaac
gccattgtagctgtgatctcctacactggctatgatatggaagatgccatgattgtgaat
aaggcttcttgggaacgaggctttgctcatggaagtgtctacaagtctgagttcatagac
ctctctgaaaaatttaagcaaggggacgatagtcttgtgtttggggtcaagcctggcgac
ccgcgggtcatgcagaagttggacagtgatggattgccattcataggggcaaagctgcag
tttggtgacccctactacagctacctgaacctcaacaccggggaaggcttcgtggtttac
tataagagtaaagaaaactgtgttgtggacaacatcaaagtgtgtagtaacgacacgggc
agtgggaagttcaagtctatctgtattaccatacgagtccctcggaatccaactattgga
gataagtttgccagccgtcacggacagaagggcattctgagcaggttgtggccagctgag
gacatgccttttactgagagcggcatggtgccagacattctgtttaacccgcatggcttt
ccctcccggatgaccatcggtatgttaatcgaaagtatggctgggaagtctgcggctctg
cacggtctctgccatgacgccacgcccttcgtcttctctgaggagagctccgccttgggt
tactttggggagatgttaaaggcggctggctacaacttctatggcacggagaggttgtac
agcggcattagcgggatggagctggaagcagatattttcatcggtgtggtttattaccag
cgcttacgccacatggtgtcagacaaatttcaagttaggacaactggcgccagggacaaa
gtcaccaaccagcctgtcgggggaagaaacgtccagggtggaatccgctttggggagatg
gaacgggatgctctcttggcacatggtacgtcctttctccttcacgatcggctcttcaac
tgctctgaccgctcggtggcccacgtatgtgtgaaatgtggcagtttgctctccccgctg
ctcgagaaacctcctccgtcgtggtctgcaatgcgcaacagaaaatacaactgcactgtc
tgtggccgcagtgacaccatcgacactgtctctgtgccgtatgtgttccggtatttcgta
gccgagttggcagctatgaatatcaaagtaaaactggatgtcatttaa
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