Pantoea ananatis LMG 5342: PANA5342_0148
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Entry
PANA5342_0148 CDS
T01728
Symbol
rfaF3
Name
(GenBank) ADP-heptose:LPS heptosyltransferase II
KO
K02843
lipopolysaccharide heptosyltransferase II [EC:
2.4.99.24
]
Organism
plf
Pantoea ananatis LMG 5342
Pathway
plf00540
Lipopolysaccharide biosynthesis
plf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
plf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
PANA5342_0148 (rfaF3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
plf01005
]
PANA5342_0148 (rfaF3)
Enzymes [BR:
plf01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.24 lipopolysaccharide heptosyltransferase II
PANA5342_0148 (rfaF3)
Lipopolysaccharide biosynthesis proteins [BR:
plf01005
]
Core region
PANA5342_0148 (rfaF3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_9
Motif
Other DBs
NCBI-ProteinID:
CCF07541
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All DBs
Position
complement(163506..164564)
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AA seq
352 aa
AA seq
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MKILVIGPSWVGDMMMSQSLYRTLKAEHPDAVIDVMAPAWCRPLLSRMPEVNQALAMPLG
HGALALGERRRLGKSLQASHYDRAYVLPNSFKSALVPFFAGIKRRIGWRGEMRYGLLNDC
RVLDKAAFPLMVERYVALAYDSPVRSARELPQPLLTPQLQVSEQEKSETSAQFQLTPERP
TIGFCPGAEFGPAKRWPHFHYATLAQQLISEGYQILLFGSAKDHSTGEEILSSLPEARRA
HCRNLAGETQLEQAVILLAQCHAVVSNDSGLMHIAAALNRPLVALYGPSSPDFTPPLSDR
ARILRLISGYHRVRKGDAGQGYHQSLIDIQPAQVHETLSTLLREVQEGTCTS
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctggtgatcggcccgtcgtgggtcggcgatatgatgatgtcgcaaagtctc
tatcgtaccctcaaggccgaacatcctgacgcagtgattgatgtgatggcacctgcgtgg
tgccgtcctttactttcacggatgcctgaagtgaatcaggcgctggcgatgccgctgggt
catggcgcgttagcgcttggcgagcgccgtcggctgggcaaatcgctccaggccagccat
tatgaccgcgcttatgttttacccaactcttttaaatcagcgctggttcccttttttgcc
gggatcaagcgccgtattggctggcgcggagaaatgcgttacggcctgttaaacgattgt
cgggtactggataaagccgcgtttccgctgatggttgagcgctatgtggctctggcttat
gactcaccagtccgctcagcgcgggaactgccgcaacccctgctaacgcctcagctacag
gtcagtgaacaggaaaaaagtgagacgtccgcgcagtttcagctgactcccgagcggccg
acgattggtttttgtcccggtgcagagtttgggccggcaaaacgctggccgcattttcac
tatgcgacgcttgcccagcagttaatcagtgagggttatcagattctgctgtttggctcg
gctaaagatcattccaccggtgaagaaatcctgtcttcgctaccggaagcgcgccgtgca
cattgccgcaatctggctggcgaaacgcagctggaacaggctgttattctgctggctcag
tgccacgcagtggtcagtaatgattcgggcctgatgcatattgccgcagcgttaaaccga
ccgcttgtcgccttatatggtcccagcagccctgactttacgccacctctgtctgaccgg
gcacgtattctccgtttaattagcggctatcatcgtgtacgcaaaggcgatgccgggcag
ggctatcaccaaagtcttatcgatattcagcccgcacaggttcatgaaacattgagcacg
ttgttgcgcgaagtccaggaggggacatgcacgtcctga
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