Pantoea ananatis LMG 5342: PANA5342_0202
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Entry
PANA5342_0202 CDS
T01728
Symbol
trmA
Name
(GenBank) tRNA (uracil-5-)-methyltransferase
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
plf
Pantoea ananatis LMG 5342
Brite
KEGG Orthology (KO) [BR:
plf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
plf03016
]
PANA5342_0202 (trmA)
Enzymes [BR:
plf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
PANA5342_0202 (trmA)
Transfer RNA biogenesis [BR:
plf03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
PANA5342_0202 (trmA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
Methyltransf_4
MTS
Cons_hypoth95
Methyltransf_11
Methyltransf_15
Methyltransf_31
Methyltransf_12
Met_10
PrmA
DUF3164
Motif
Other DBs
NCBI-ProteinID:
CCF07595
LinkDB
All DBs
Position
complement(218358..219461)
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AA seq
367 aa
AA seq
DB search
MTPEHLPVEQYDAQLAEKVSRLETMMTPFAAPAVEVFRSPVSHYRMRAEFRIWHEGDDLY
HIIFDQETKQRIRVDQFPAASELINQVMPKMMAAIRDNRLLRHKLFQIDYLSTMSHQIVI
SLLYHRKLDEEWQQAASTLRDQLRAEGIDVQLIGRATKTKICLDRDYVDERLPVAGKEMI
YRQVENSFTQPNAAMNIQMLEWALDVTTGSRGDLLELYCGNGNFSLALARNFRRVLATEI
AKPSVASAQYNIAANQVDNVQIIRMAAEEFTQAMNGVRSFNRLEGIDLKSYDCETIFVDP
PRSGLDEETVKMVQAYPAILYISCNPQTLCDNLRILAQTHDVTRLALFDQFPYTHHMECG
VLLTCKA
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgacacccgaacatctccctgttgaacagtatgacgcgcagctggcggaaaaagtcagt
cggttagaaacgatgatgacgccattcgctgcgcccgccgtggaggtgtttcgttcaccc
gtcagtcactaccgcatgcgagcagaattccgcatctggcacgagggtgatgacctctac
catattatcttcgatcaggagacgaaacagcgcatacgcgtcgatcagtttcctgcggcc
agtgagttaatcaatcaggtcatgccaaaaatgatggcggccattcgggacaatcgtctg
ctgcgccacaagctgtttcagatcgactacctgtccacgatgagtcatcagatcgtgatt
tcgctgctctaccaccgcaaactggatgaggaatggcagcaggccgccagcacgttacgc
gatcaattgcgcgctgaaggtattgatgtccagctgattggccgcgcgaccaagaccaaa
atctgcctcgatcgggattatgtcgatgagcgtttgccggtggccggtaaagagatgatt
taccgtcaggtagaaaacagctttacgcagcctaacgccgccatgaacattcaaatgctg
gaatgggcactggacgtcaccacgggttctcgcggcgatctgctggagctctactgtggt
aatggcaacttctcgctggcgctggcccgaaatttccgccgggtactggcaacagaaatc
gccaaaccttccgtagcgtcagcgcagtacaatattgccgccaaccaggttgataacgtg
cagattattcgcatggcggccgaagagtttacgcaggcgatgaatggcgtgcgcagcttt
aaccggctggaagggatcgatctgaagagttatgactgcgagacgatctttgtcgatccg
ccgcgcagcgggctggatgaggaaaccgttaagatggtgcaggcttatcctgccattctc
tatatttcctgcaatccgcaaaccctgtgcgacaatctgcggatactggcgcaaacccac
gacgtcacgcggctggcgctgtttgaccagttcccgtacacccaccatatggaatgcggc
gtgctgctgacgtgtaaagcgtaa
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