Pantoea ananatis LMG 5342: PANA5342_2130
Help
Entry
PANA5342_2130 CDS
T01728
Symbol
yciR3
Name
(GenBank) diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
plf
Pantoea ananatis LMG 5342
Pathway
plf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
plf00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PANA5342_2130 (yciR3)
Enzymes [BR:
plf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
PANA5342_2130 (yciR3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS
PAS_10
PAS_4
GGDEF_2
Motif
Other DBs
NCBI-ProteinID:
CCF09523
LinkDB
All DBs
Position
complement(2233837..2235822)
Genome browser
AA seq
661 aa
AA seq
DB search
MTDEQGQSLLYTLFGTTSPHWRLTADSDALLFALDESSNTSVAVPLTPGQCSLLRAMPVI
TSSINLTLTIHGEQVAMHFVGRRINQSVWAGTASAWGDTSAVARDLTLGLSFAEQVVSEA
NSVIVILDQRGNIQRFNRLSEEYTGLYEQDVIGRNVFQLFMTKQEAAASRRNIAGFFRDG
NSYEVERWIKTMKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRVMANTD
GITGLPNRHAIHQQISHALERAEGSETGVVYLDLDNFKKVNDAYGHMFGDQLLQAVSLAI
LSCLSKNQTLGRLGGDEFVVLAEHTSQAALEAMATRILDRLRQPFRIGLIEVYSGCSVGI
ALAPLHGEDRECLIRNADTAMYHAKENNRGSYCVFAEEMNRRVFEYLWLDTNLRKALEQD
HLLVHYQPKVDADGKVRSAEALVRWNSPERGLVSPGEFIPYAEESGLIVPLGRWVMLNVL
KQIIAWREQNIYLRVAVNVSARQLLDQTIYSDLKQALTDAGLTECPVDIELTESCLIENE
AEALKLMRKFQELGAQIHLDDFGTGYSSLSQLARVPINAIKLDQSFIRNVNKRPVSQSLV
RAIVAVAKALDLQVIAEGIETADEEAFVLKSGVDGRQGYFYAKPMPADQFGHWLAQHPAR
V
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatgaacaagggcaatcgttgttgtataccttgtttggtacaaccagccctcat
tggcgattaaccgcagacagtgatgcgctgctttttgccttagatgaatcatcgaacacc
agcgttgctgtgccactgacgcccggccagtgcagtttattgcgcgcgatgcccgttatt
acttccagtattaatctgacgttaacgattcacggcgagcaggtcgccatgcattttgtt
ggccggcggatcaaccagtccgtgtgggcgggcaccgcttcggcatggggcgatacgtcg
gcggtggcgcgcgatctgacgctgggcctgtcatttgctgaacaggtcgtgtcggaggcc
aactcggtcatcgttatccttgatcagcgcggcaacattcaacgctttaaccgcctcagc
gaagagtataccggcctgtatgaacaggatgtgatcggccgtaatgttttccagctgttt
atgaccaaacaggaagccgcggcctcacgcaggaacatcgcagggttctttcgcgatgga
aattcctacgaagtggaacgctggatcaagacgatgaaaggacagcgactgtttcttttt
cgtaataagtttgttcacagtggcagcggtaaaaatgaaattttcctcatctgttcagga
acggatattacggaagaacgccgtgcgcaagagcgcctgcgcgtgatggccaacaccgat
ggcatcactggcctgcccaatcgccacgcgattcaccagcaaatcagccatgcgctggag
cgggctgagggcagtgaaaccggcgtggtctacctggatttagataatttcaaaaaagtg
aatgatgcctacggtcatatgttcggcgatcaactgttgcaggccgtttccctggcgatt
ctgagctgtctgagcaagaaccagacgcttggacggctgggcggtgacgagtttgtggtg
ctggctgagcacaccagtcaggctgcgctggaagcaatggctacgcgcattctcgatcgc
ctgcgtcagcctttccgcatcggcctcatcgaggtttacagcggctgctccgtcgggatc
gccctggccccgctacatggagaggaccgtgagtgtctgattcgtaacgctgatacggcg
atgtatcacgccaaagagaacaaccgtggcagctattgtgtttttgccgaggagatgaac
cgccgggtttttgaatatctctggctcgacaccaacctgcgtaaagcgctggagcaggac
catttattagtgcactaccagcccaaagtggatgctgacggtaaagtgcgcagtgcggaa
gcgctggtgcgctggaactcacccgagcgcgggctggtttcacccggggaatttattccc
tacgcggaagaatccgggctgatcgtgccactgggtcgctgggtcatgcttaacgtgctg
aagcaaattattgcctggcgggagcagaatatttatctgcgcgtcgcggttaatgtctcg
gcgcgccagttactcgaccagacaatctacagtgacctgaaacaagccctgacggatgcc
ggtttaaccgagtgcccggtggatatcgaactgacggaaagctgcctgattgagaatgaa
gccgaagcgctcaagctgatgcgtaaatttcaggaactgggtgcccagattcaccttgat
gactttggcaccggttattcctccctttcacagctggcgcgcgtccctattaatgccatc
aaactggatcaaagctttatccgtaatgtgaataaacgtcccgtttctcagtcactcgtc
agggcgattgttgcggtagcgaaggcgcttgatttgcaggtgattgccgaaggtattgaa
accgccgatgaagaagcctttgtgttaaaaagcggcgtcgatgggcggcaaggctatttt
tacgcaaaaccaatgcccgccgatcagtttgggcactggctggctcagcatcctgcccgc
gtgtaa
DBGET
integrated database retrieval system
