Pantoea ananatis LMG 5342: PANA5342_2894
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Entry
PANA5342_2894 CDS
T01728
Symbol
ycbY
Name
(GenBank) N6-Adenine-specific DNA methylase YcbY
KO
K12297
23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:
2.1.1.264
2.1.1.173
]
Organism
plf
Pantoea ananatis LMG 5342
Brite
KEGG Orthology (KO) [BR:
plf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
plf03009
]
PANA5342_2894 (ycbY)
Enzymes [BR:
plf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.173 23S rRNA (guanine2445-N2)-methyltransferase
PANA5342_2894 (ycbY)
2.1.1.264 23S rRNA (guanine2069-N7)-methyltransferase
PANA5342_2894 (ycbY)
Ribosome biogenesis [BR:
plf03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PANA5342_2894 (ycbY)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0020
Methyltrans_SAM
THUMP
Cons_hypoth95
Methyltransf_31
Methyltransf_25
Methyltransf_11
Methyltransf_15
Methyltransf_24
Motif
Other DBs
NCBI-ProteinID:
CCF10287
LinkDB
All DBs
Position
complement(3016877..3018991)
Genome browser
AA seq
704 aa
AA seq
DB search
MNSLFASTARGLEELLKNELDALGAQDLQVVQGGVHFKADDRVMYQSLMWSRLASRILLP
LTEVGVYSDLDLYLGVQGIDWPAMFGSDKTFVVHFNGTNDEIRNSQFGALRVKDAIVDSF
TRRNLARPDVDREQADIRINVWLDDDRASIALDLSGSALHQRGYRQQTGQAPLKENLAAA
IVMRSGWQPSTPLIDPMCGSGTLLIEAALMACDRAPGLLRNQWGFTAWAGFNESLWREVK
SDAQARARAGTAACQARFFGYDNNGRVLEWAKANARRAGVFELFTFGQQDLLKLQNPLQT
EVTGTVLSNPPYGERLESEPALIALHSQLGRLMKQHFAGWNLSLFSASPELLSCLQLRAD
RQFKAKNGPLDCVQKNYQLSANSAERGNQIAEDYANRLRKNLKKLDKWARQEGIECYRIY
DADLPDYNVAVDRYADWVVVQEYAPPKTIDANKARQRLFDVISATLSVLELPSNRLILKT
RERQKGKAQYQKLSEKGDYFEVQEFNARFLVNLTDYLDTGLFLDHRIARKMLGQMSQGKD
FLNLFAYTGSASVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRQHRLLHADCLSW
LNESDENFDLIFIDPPTFSNSKRMEESFDVQRDHMMLMRNLKRLLRKGGTIMFSNNKRGF
KMDLDGLNALGLQAQDITQKTLSQDFARNRQIHNCWLITHAGKE
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgaattctctgtttgccagcacggcgcgtgggctcgaagagctgttaaaaaatgagctg
gacgcgctgggcgcgcaggatttgcaagtggtacagggaggcgttcacttcaaggccgat
gaccgcgtaatgtaccaaagcctgatgtggagtcgtctggcttcgcgtattttgctgcct
ctgaccgaggtcggcgtttacagcgatctcgatctctatctgggcgtgcagggcattgac
tggcccgccatgttcggtagcgacaaaaccttcgtggtgcactttaatggcaccaacgat
gagatccgtaatagccagtttggcgcgctgcgcgtcaaagatgcgattgtcgacagtttt
acccgtcgtaacctggcacgcccggacgtcgatcgtgaacaggccgatattcgtattaac
gtctggcttgatgacgaccgcgccagtatagctctggacttaagcggcagtgccctgcat
cagcgcggctatcgtcagcaaacgggtcaggcgccgctgaaagaaaacctggccgcagcg
attgtgatgcgttcaggctggcagccgtccacgccgctcatcgatccgatgtgtggttca
ggcacattactgatcgaagctgcgctgatggcctgcgaccgcgcgccgggtttactgcgt
aaccagtggggcttcacggcatgggccggttttaacgaaagcctgtggcgcgaggtcaag
agcgatgctcaggcccgtgcccgtgccgggacggcggcgtgccaggcgcgcttttttggt
tatgacaataatggacgggtgctggaatgggcaaaagcgaatgcacgtcgtgccggcgtt
tttgaactgttcacctttggccaacaggatttgctgaagctgcagaatcctcttcagact
gaggtgacgggaacggtgctcagtaacccaccttacggtgaacgtcttgaaagtgagcct
gcgcttattgcgctgcacagccagctcggccggttgatgaagcagcacttcgccggctgg
aatctgtcgctgtttagcgcatcgcccgaactactgagctgtctgcaactgcgtgccgac
cgtcagttcaaagccaaaaatggcccgctggactgtgtgcagaaaaactatcagctgtcg
gccaacagcgctgagcgcggtaatcagattgctgaagattacgcgaaccgcttgcgcaaa
aacctcaagaagctggataagtgggcgcgccaggaaggcatcgagtgctaccgcatttat
gacgccgatctgccggactataatgtggccgtggatcgctatgcggactgggtggtggtg
caggaatatgcgccacccaaaaccatcgacgcgaataaagcccgtcaacgcctgtttgac
gtgattagtgccacgctgagcgtgctggagctgccgtcaaaccgcttaatcctcaagacg
cgcgaacgtcagaagggcaaagcgcagtatcaaaagctgagtgagaagggcgactatttt
gaagtgcaggaatttaacgcccgtttcctggtgaacctgactgactatctggatacggga
ttgttcctcgatcaccgtattgcccgcaagatgctgggtcagatgagtcagggcaaggat
ttcctgaacctgtttgcttacaccggctctgccagcgtgcatgcgggtctgggcggcgca
cgctctaccaccaccgtggatatgtcgcgtacctatctggagtgggcagagcgtaacctg
cggctgaacggcctcaccggtcgtcagcatcgcctgctgcatgccgactgcctgagctgg
ctgaacgagagcgacgaaaatttcgacctgatctttatcgatccgcccacgttctctaac
tcaaaacgtatggaagagagttttgatgtgcagcgcgatcatatgatgctgatgcgtaac
ctgaaacggctgttgcgtaaaggcggtactatcatgttctcgaataataaacgtggtttc
aaaatggatctggatggccttaacgcattggggctccaggctcaggatatcacccagaaa
accctgtcacaggattttgcgcgtaatcgccaaattcataactgctggctgatcactcat
gctggtaaggaataa
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