Pantoea ananatis LMG 5342: PANA5342_3498
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Entry
PANA5342_3498 CDS
T01728
Symbol
ldcC
Name
(GenBank) lysine decarboxylase
KO
K01582
lysine decarboxylase [EC:
4.1.1.18
]
Organism
plf
Pantoea ananatis LMG 5342
Pathway
plf00310
Lysine degradation
plf01100
Metabolic pathways
plf01110
Biosynthesis of secondary metabolites
plf01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
plf00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
PANA5342_3498 (ldcC)
Enzymes [BR:
plf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.18 lysine decarboxylase
PANA5342_3498 (ldcC)
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GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
CCF10891
LinkDB
All DBs
Position
complement(3649812..3651986)
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AA seq
724 aa
AA seq
DB search
MPQQSGRCALNILAIMGAHGVFYKDEPLRELEVALSQQGFQLIRPKNNDDLLKLIEHNPR
ISGVIFDWDEHNSPELCGEINQLNEYLPLYAFINTHSQMDISINEMRMPLHFFEYALNAA
DDIALHIRQYTDDYLDNITPPLTKALFTYVKEGKYTFCTPGHMAGTAFQKSPVGCLFYDF
FGANTLKSDISISVTELGSLLDHTGPHLEAEEYIARTFGAEQSYMVTNGTSTSNKIVGMY
AAPAGSTILVDRNCHKSLTHLLMMSDLIPIWLKPTRNALGILGGIPQKEFTRASIEQKVA
VTPRASWPVHAVITNSTYDGLLYNTQYIKQTLEVPSIHFDSAWVPYTNFHPIYEGKSGMS
GERVPGKVFYETQSTHKLLAAFSQASLIHIKGDYDEQTFNEAYMMHTTTSPNYAIVSSIE
TAAAMLRGNPGKRLINRSVERALHFRREIQRLREECDSWFFDIWQPEHVDEAQCWPIQPG
EEDWHGFTQADRDHMYLDPIKVTILTPGMSELGVMAEEGIPAALVAKFLDERGIVVEKTG
PYNLLFLFSIGIDKTKAMSVLRGLTEFKRAYDLNLRVKNMLPDLYAEDPDFYRNMRIQTL
AQGIHRLIQQHDLPQLMLKAFDVLPEMKMTPHQAFQQQVKGNIETVNINELVGRISANMI
LPYPPGVPLVMPGEMITEQSRAVLDFLLMLCSIGRHYPGFETDIHGAILTEEGEYRVRVL
KQAG
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgcctcaacaatcagggagatgtgcattgaatattctggcgatcatgggcgcgcatggc
gtgttttacaaagatgaacccttgcgcgaactggaagtcgcgctgagtcagcaaggtttt
caactcatccggccgaaaaacaatgacgatctgctaaaactcattgaacacaatccccgt
atcagcggcgtcatttttgactgggatgaacacaacagcccggagctgtgtggtgaaatc
aatcagcttaatgaatacctgccgctgtatgcctttatcaatacccattcccagatggat
atcagtatcaatgaaatgcgtatgccgctgcatttctttgaatatgcgctgaatgccgcc
gacgatattgctcttcacatccgacagtacacagatgactacctcgacaacatcacgccg
ccgttgaccaaagcgttgtttacctatgtgaaagaggggaaatacaccttctgtacccca
ggccatatggccggtacggccttccagaaaagcccggtcggctgcttgttctatgacttt
tttggtgccaatacgctgaagtcggatatctcgatttcggtaacggaactgggatcgctg
ctggaccacacagggccgcatctggaagccgaggagtatatcgcccgcacttttggggcg
gaacagagctacatggtgaccaacggcacctcgacctcgaataaaatcgtcggaatgtat
gctgccccggcaggcagcacgattctggtggaccgcaactgccataagtcgctcacgcat
ctgttgatgatgagcgatttgatccccatctggctcaagccaacacgcaacgcattgggt
attttgggcggtattccgcaaaaagagttcacccgtgccagcatcgagcaaaaagtggcg
gtcacgccgcgcgccagttggccggtacatgcggtgattaccaattcgacctacgacggt
ttgctctacaacactcagtacatcaagcaaacccttgaggtgccgtcgatccactttgat
tctgcctgggttccctataccaactttcatcccatctatgaggggaaaagcggcatgagc
ggtgagcgggtgccgggtaaagtcttctatgaaacgcagtccacccataaactgctggcg
gctttttcccaggcttcgctgattcatattaaaggcgactatgacgagcagacgtttaat
gaagcctacatgatgcacaccaccacctcaccgaactatgccatcgtctcatccattgag
acagcggcggcgatgctgcggggaaatccgggcaaaaggctcattaaccggtcagtggaa
cgcgccctgcatttccgtcgtgagatacagcggttgcgagaagagtgcgacagctggttt
tttgatatctggcagcctgaacacgttgatgaagcccagtgctggccgatacagccgggg
gaagaggactggcacggattcacccaggccgatcgcgaccacatgtatcttgatccgatc
aaggtaacgatcctgacacccggcatgagcgagctgggcgtgatggcggaagagggcatt
ccggcggcgctggtggcgaagttcctggatgagcgcggcatcgtggttgaaaaaaccggc
ccttacaatctgttattcctgtttagtatcggcattgataaaaccaaagcgatgagcgtg
ctgcgagggttaacggaatttaagcgcgcctacgatctcaatctccgggtcaaaaatatg
ttgccggatctctatgcggaggatcccgatttttatcgcaacatgcgtattcagacgctg
gcgcaggggatccaccgtcttatccagcaacatgatttaccgcagctcatgttgaaggcg
tttgacgtgttgcccgagatgaaaatgacgccgcatcaggcttttcagcaacaggtgaag
ggcaatattgaaaccgtgaacatcaatgagctggtgggccgcatctctgccaacatgatc
ctgccttatcctccgggcgttcctctggtgatgcctggtgaaatgatcacagaacaaagc
cgcgccgtactcgacttcctgttaatgctgtgtagcattggacgccactatcctggcttt
gagacggatattcacggcgcgatcctcaccgaagagggggaatatcgggtacgtgtgctg
aaacaggccggctaa
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