Pseudomonas lijiangensis: KQP88_01780
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Entry
KQP88_01780 CDS
T08713
Symbol
thiI
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
plij
Pseudomonas lijiangensis
Pathway
plij00730
Thiamine metabolism
plij01100
Metabolic pathways
plij01240
Biosynthesis of cofactors
plij04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
plij00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
KQP88_01780 (thiI)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
KQP88_01780 (thiI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
plij03016
]
KQP88_01780 (thiI)
Enzymes [BR:
plij01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
KQP88_01780 (thiI)
Transfer RNA biogenesis [BR:
plij03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
KQP88_01780 (thiI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
QueC
Rhodanese
tRNA_Me_trans
Motif
Other DBs
NCBI-ProteinID:
QWU83553
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Position
384055..385509
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AA seq
484 aa
AA seq
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MKLIVKVFPEITIKSPPVRKKFIRQLAKNIRTVLRELDADIVVGGVWDNLEVETRLTDPK
VLQGITERLSCMPGIANFLQVAEYPLGDLDDIVAKCKMHYGDLLPGKMFSVRCKRAGRHD
FSSMDVEKYVGSKLRQQCSAAGIELRKPELVVRMEIRDQRLFVIHDQHTGMGGYPLGALE
QTLVLMSGGFDSTVAAYQIMRRGLMAHFCFFNLGGRAHELGVMEVAHFIWKKYGSSQRVL
FVSVPFEEVLGEILQKVDNSHMGVVLKRMMLRAASSVADRLEIDVLVTGEAISQVSSQTL
PNLSVIDSATDKLVLRPLIASHKQDIVDLATEIGTAEFARHMPEYCGVISVNPKTNAKRN
RVEYEEKQFDMAVLERALERARLVTIDRVIDDLSQNVEIEEVSQALAGQVVIDIRHPDAQ
EDQPLQVPGVEIQTLPFYALNSRFKELDNTRQYLLYCDKGVMSRLHAHHLLSEGHANVRV
YRPS
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaaactaatcgtcaaagtttttcctgaaatcaccatcaaaagcccgccggtgcgcaag
aagttcatccgccagctggccaagaacattcgtaccgtgctccgtgaactggacgcggac
attgtcgtgggtggcgtatgggacaaccttgaggtcgaaacaaggctgaccgatccaaag
gtcctgcagggcatcaccgagcgcctgagctgcatgccgggcatcgccaatttcctgcag
gttgccgaatacccgctgggcgatctggatgacatcgttgccaagtgcaagatgcattac
ggcgacctgctgccgggcaagatgttttccgtgcgctgcaagcgtgcggggcggcacgat
ttcagctccatggacgtcgagaagtacgtcggcagcaagttgcgccagcaatgcagcgcc
gccggtatcgagctgcgcaagcccgaactcgtggtgcgcatggaaattcgcgaccagcgt
ctgtttgtcattcatgaccagcacactggcatgggcggttatccgctgggcgcgctggaa
cagacgctggtactgatgtccggtggtttcgactcgaccgtggcggcctaccagatcatg
cgtcgtggcctgatggcgcatttctgcttcttcaatctgggtggtcgtgcccatgagctg
ggcgtgatggaagtcgctcacttcatctggaagaagtacggcagctcccagcgagtgctg
tttgtaagcgtgcctttcgaggaagttctgggagaaattctgcagaaagtcgataacagt
catatgggtgtagttttgaagcgtatgatgttgcgcgctgcctcatctgttgccgaccgt
ctcgaaatcgatgtgctggtgacgggggaagcgatttcgcaggtgtccagccagacgctg
cccaatctgtcggtcatcgactcggccaccgacaaactggtgctgcgaccgctgattgcc
agccacaagcaggacatcgtcgatctggcgactgaaatcggcacggccgaattcgcccgg
cacatgcctgaatattgcggggtgatttcggtcaaccccaagaccaacgccaagcgtaat
cgcgttgagtatgaagagaagcagttcgacatggctgttcttgagcgagcgctcgaacgt
gccaggctggtgaccattgatcgggtgatcgacgatctgagccagaatgtcgaaatagaa
gaagtcagccaggcgctggccggtcaggtcgtcatcgacatccgtcatccggatgcccag
gaagaccagccgctgcaagtgccgggcgtagagatacagacgctgccgttctatgcattg
aacagccgcttcaaggaactggataacacgcgccagtacctgttgtattgcgacaaaggc
gtcatgagtcgcctgcatgctcaccatctgctcagtgaggggcatgccaatgtgcgcgtt
tatcgaccgagctaa
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