Polaribacter litorisediminis: K8354_02090
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Entry
K8354_02090 CDS
T07786
Symbol
hemB
Name
(GenBank) porphobilinogen synthase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
plit
Polaribacter litorisediminis
Pathway
plit00860
Porphyrin metabolism
plit01100
Metabolic pathways
plit01110
Biosynthesis of secondary metabolites
plit01120
Microbial metabolism in diverse environments
plit01240
Biosynthesis of cofactors
Module
plit_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:
plit00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
K8354_02090 (hemB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
plit04147
]
K8354_02090 (hemB)
Enzymes [BR:
plit01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
K8354_02090 (hemB)
Exosome [BR:
plit04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
K8354_02090 (hemB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALAD
Motif
Other DBs
NCBI-ProteinID:
UAM98645
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All DBs
Position
484360..485328
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AA seq
322 aa
AA seq
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MFRTRRLRKSEGIRRLVRETKLSVDNFIYPLFIEEGENIETEIVSMPGIKRFSLDRISKE
LNEVVSLNIPAVLLFGIPSNKDDEGTETWNENGIMQQAIRFIKKNYPSLYVITDVCFCEY
TSHGHCGIIHENDVDNDATLVNIAKQVVSHAKAGVDMVAPSGMMDGTIDMVRQSLDNSGF
VNLPIMAYAVKYASAFYGPFRDAADSAPTFGDRRTYQMDPANRDEGMREATFDDQEGADI
LMVKPALSYLDIIRDLKNNFDRPIACYNVSGEYAMVKAAAEKGWIDGEKVMMESLLSMKR
AGADIIITYFAKEAAKVLLKGC
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgttcagaactcgcagattaagaaagtcagaaggaattcgcagattagttagagaaact
aaattgtctgtagataattttatttacccattatttatagaagaaggagaaaacattgaa
actgaaattgtttctatgccaggcatcaaacgtttttctttagacagaatttctaaagaa
ttaaatgaagttgtttctttgaatattcctgcagtattattgttcggaattccgtccaac
aaagatgatgaaggtacagaaacttggaacgaaaacggaattatgcaacaagcaattcgt
tttattaaaaaaaattatcctagtttatatgtaattacagatgtttgtttttgcgaatat
acatcgcatggtcattgcggcattattcatgagaatgatgttgataatgatgcaacttta
gtaaatattgcaaaacaagtagtttcgcatgcaaaagctggcgtagatatggtagcgcct
tcaggaatgatggatggaaccatagatatggtgcgccaatctttagacaattcggggttt
gtaaacttgccaattatggcatatgcagtaaaatatgcatccgctttttacgggccattt
agagatgctgcagattctgcacctacttttggtgatcgaagaacctatcaaatggatcct
gcgaatagagatgaaggaatgcgtgaagctacttttgatgatcaagaaggagccgatatt
ttgatggtaaaaccagcattatcctatttagatatcattagagatttaaagaataatttc
gacagaccgattgcatgttataatgtaagtggagaatatgcaatggtaaaagctgcagca
gaaaaaggttggattgacggtgaaaaagtaatgatggaaagtttactatcaatgaaaaga
gcaggagcagacattattattacgtattttgcaaaggaggcagctaaagttttattaaag
ggctgttaa
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