Purpureocillium lilacinum: VFPFJ_03393
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Entry
VFPFJ_03393 CDS
T05029
Name
(RefSeq) RNA polymerase Rpb7-like domain-containing protein
KO
K03015
DNA-directed RNA polymerase II subunit RPB7
Organism
plj
Purpureocillium lilacinum
Pathway
plj03020
RNA polymerase
plj03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
plj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
VFPFJ_03393
09124 Replication and repair
03420 Nucleotide excision repair
VFPFJ_03393
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plj03021
]
VFPFJ_03393
03019 Messenger RNA biogenesis [BR:
plj03019
]
VFPFJ_03393
03400 DNA repair and recombination proteins [BR:
plj03400
]
VFPFJ_03393
Transcription machinery [BR:
plj03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
VFPFJ_03393
Messenger RNA biogenesis [BR:
plj03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
VFPFJ_03393
DNA repair and recombination proteins [BR:
plj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
VFPFJ_03393
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SHS2_Rpb7-N
S1
Motif
Other DBs
NCBI-GeneID:
28885524
NCBI-ProteinID:
XP_018180372
UniProt:
A0A179HQP1
LinkDB
All DBs
Position
Unknown
AA seq
171 aa
AA seq
DB search
MFFLYNMERRVTLHPSYFGRNMHELVTSKLLKDVEGTCAGSYYIISIMDTFDISEGRILP
GNGLAEFTVGYRAVVWRPFKGETVDAVVYSINPQGFFAQAGPLRLFVSAHLIPSDIKWDP
NATPPQFTNNEDTVIEPGTHVRVKIIGTRTEVGEMWAIGSIKEDYLGCLQD
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atgttctttctctacaacatggagcgcagggtcaccctgcacccctcctatttcggccga
aatatgcacgagctggtgaccagcaagctgctgaaggacgtcgagggcacctgtgccggc
agctactacatcatctctatcatggacacgttcgacatttccgagggtcggattctgccg
ggcaatgggctggccgagttcacggtcgggtatcgagcggtcgtctggcggccgttcaag
ggagagacggtcgatgccgtggtgtactcgatcaacccgcagggtttcttcgcccaggct
gggccactgcgtctttttgtttcggcgcatctgattccgagcgacatcaaatgggacccc
aacgccacaccgccacagttcactaacaatgaggacactgtcatcgagcccgggacacac
gtgcgggtcaagatcataggcacccgtaccgaggttggagagatgtgggcgattggcagc
atcaaggaggactatctcggatgccttcaggactga
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integrated database retrieval system