Planctopirus limnophila: Plim_2405
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Entry
Plim_2405 CDS
T01225
Name
(GenBank) succinyl-CoA synthetase, alpha subunit
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
plm
Planctopirus limnophila
Pathway
plm00020
Citrate cycle (TCA cycle)
plm00640
Propanoate metabolism
plm00660
C5-Branched dibasic acid metabolism
plm01100
Metabolic pathways
plm01110
Biosynthesis of secondary metabolites
plm01120
Microbial metabolism in diverse environments
plm01200
Carbon metabolism
Module
plm_M00009
Citrate cycle (TCA cycle, Krebs cycle)
plm_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
plm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Plim_2405
00640 Propanoate metabolism
Plim_2405
00660 C5-Branched dibasic acid metabolism
Plim_2405
Enzymes [BR:
plm01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
Plim_2405
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
ADG68231
UniProt:
D5SP87
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All DBs
Position
complement(3135976..3136878)
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AA seq
300 aa
AA seq
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MSILVDKNTKIICQGITGKAGLFHSQQCRAYAKEHRPGENVFVGGVTPGKGGTTVDDFPV
FNTVAEACAKTGANCSLIFVPPPFAADSILEAADAGIELIVCITEGIPVLDMARVKKALA
FYPKSRLIGPNCPGVITPGVAKIGIMPGYIHKPGTVGLISKSGTLTYEATWQLGNLGLGQ
STAVGIGGDPIIGTPYIELLEMFQNDPGTEAIMMIGEIGGNAEIKAAEYIKAHVTKPVAA
FIAGQTAPPGKRMGHAGAIISGGAGTAEEKMAALEAAGVVVARSPGEMGVALKKAIDNRK
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatccttgtggataagaataccaagatcatttgccaggggattactggcaaagcc
gggctgtttcatagtcagcagtgccgggcctatgccaaagagcatcgtcctggtgaaaat
gtgtttgtcggcggcgtgactcctggtaaagggggcacaacagtcgatgattttccggtc
tttaatacagttgctgaggcctgtgccaagacgggtgccaactgctcgctgattttcgta
ccaccaccctttgcagccgattccattctggaagcggctgatgccgggatcgagctgatt
gtctgtattactgaaggaattcccgtgcttgatatggcgcgggtgaagaaggcgttggct
ttctatcccaaatcgcgtctgatcgggccgaactgcccgggtgtgatcactcccggtgtg
gcgaagattggcattatgcccggctacattcataagcctgggactgtggggctgatcagc
aagagcggtacgctcacctatgaagccacatggcaactgggaaatctggggttagggcaa
tcgacagctgtcggtattggtggggatcccatcatcgggacaccttacatcgagctgctc
gaaatgttccagaacgatccggggaccgaagcgatcatgatgattggcgaaattggtgga
aatgccgaaatcaaggcggcggagtacatcaaggcccacgtgaccaagccagtggcggca
ttcattgctggtcagaccgcacctcctggcaagcgcatgggtcatgcgggggcgattatc
tcgggtggtgcagggacagccgaagaaaagatggcggctctggaagctgcgggtgtggtt
gtggcacgcagcccaggcgaaatgggtgtggctttgaagaaagcgatcgacaatcgcaag
tag
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