Planctopirus limnophila: Plim_2915
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Entry
Plim_2915 CDS
T01225
Name
(GenBank) protein of unknown function DUF116
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
plm
Planctopirus limnophila
Pathway
plm00900
Terpenoid backbone biosynthesis
plm01100
Metabolic pathways
plm01110
Biosynthesis of secondary metabolites
Module
plm_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
plm00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
Plim_2915
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
plm01006
]
Plim_2915
Enzymes [BR:
plm01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
Plim_2915
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
Plim_2915
2.5.1.29 geranylgeranyl diphosphate synthase
Plim_2915
Prenyltransferases [BR:
plm01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
Plim_2915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
DUF116
Motif
Other DBs
NCBI-ProteinID:
ADG68737
UniProt:
D5SS13
LinkDB
All DBs
Position
complement(3771553..3773457)
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AA seq
634 aa
AA seq
DB search
MKQIPMSMTSTPASQVIVPVEEHPEADKPKRRSTAQFKFVPETLAHREKIRSDAVAFGKT
LDRSKPFTRNQLEAMAREMLATHGEPEKFLGFAMVMLGNVFWREQFLAIPFERRMLLLPH
CLKHAEGCPADYDEFGLDCERCGACSIADYKVKAEQLGYKVLVAEGSPIVLKIIVSGHID
GILGVACLNVLEKAIDKVLIAGVPSYAVPLHSGDCKNTTLDESWVWECLDKYEPLPDHKT
RSFVPLMRASNRAFDEHFETLTQPIRTDALKGDRVKAAGGADTQDQLSPLKFTETVVLDW
LQHGGKRLRPFITLAAYDALTGAAGLTADHQDQALEYPPAVNRVAMAIEAFHKASLIHDD
IQDNDQFRYGKETLHRQYGVGPAINLGDHLIGAGYRLVSASRKELGAEVAADILDAFSAA
HMKLCEGQGAELQWSRSGRHDLTPAEAMKIYALKTSPAFEAALYAGIRMAGPVDDYAEMI
TQFSRHLGVAFQILNDLSDWLGDDHNKLVAGQDAQSMRPTLLWAMAWEAAAPADREELLR
VASSTYSPHAKFEAFKRVFEKLGIFTKAQTLVEKSRARVETLADSVHPDPLRELLYFVID
TVLSEEHLPAAPAPVVVSMETVRKPVLHQLQVNA
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacagatacctatgtcgatgacttctacgccggcatcacaagttattgttcccgtt
gaggagcatcccgaagccgataagcccaaacgccggagcacggcccaattcaagttcgtt
ccggagacgctcgcgcatcgcgagaagatccgctctgatgcggtggcttttggaaagaca
ctggatcgctcgaagccattcacccgcaatcaactggaagcgatggcgcgggagatgctg
gccacgcatggtgagcccgagaagtttctcggctttgcgatggtgatgctggggaatgtc
ttctggcgcgaacagtttctggccattccttttgagcggcggatgctgctgttgccccac
tgcttgaagcatgccgaaggttgtccggccgactatgacgagtttggtctggattgcgag
cgctgcggtgcctgttcgattgcagattacaaggtgaaagccgaacagctgggctacaaa
gtcctggtggctgaaggctcgccgattgtgctgaagattatcgtctccgggcatatcgat
ggcattctgggagtggcctgcctgaatgtgctggagaaggcgatcgacaaggtgctgatt
gccggcgtcccttcgtatgcggtgccgctgcattcgggtgattgtaaaaatacgacgctc
gatgaatcgtgggtctgggaatgtctcgataagtatgagccattgcccgatcataaaact
cgcagctttgtgcctttgatgcgggcctcgaaccgggcctttgatgagcatttcgaaacg
ctgactcaacccattcgcacggatgcactcaaaggtgatcgagtgaaagcagctggcgga
gctgacactcaggatcaattgtcaccactcaagtttacggagacggtggtgctcgactgg
ttgcagcatgggggcaagcggctgcggccttttatcaccctggctgcctacgatgccctc
acgggtgctgccgggctgacggctgatcatcaggatcaggccctcgaatacccaccggct
gtcaatcgtgtggccatggccatcgaagcttttcataaagcctcgctgatacacgatgat
attcaggacaacgaccagttccgttatggcaaggaaactttgcacaggcagtatggtgtc
gggccggccattaatctgggtgatcatttgattggggcaggttatcgactggtttctgcc
tcacgaaaagagctgggtgctgaagtcgctgccgatattctcgatgcgttttcggcagct
catatgaagctgtgcgaagggcagggagctgagttacagtggtcacgttctggccgacat
gatctgactcctgctgaagcgatgaagatctatgcgctgaagacctcgccggcgttcgaa
gcggcactgtatgccggcattcgcatggcggggccggtggatgactacgccgaaatgatc
acacaattttcgcgtcatttaggtgtggccttccagattctgaatgatctgagtgactgg
ctgggtgatgatcacaacaagctggtggctggtcaggatgctcagtccatgcgaccgacg
ctcttgtgggccatggcctgggaagcggcggcgcctgctgatcgcgaagagttgctgcgc
gtggccagttcgacttacagcccgcatgcgaaattcgaagccttcaagcgggtttttgaa
aagctggggatctttaccaaagctcagacgttggtcgaaaaatcgcgagcccgggtggaa
actctggccgacagtgtccatcccgatccgttgcgggagctgctctatttcgtgatcgat
accgtcctctcggaagagcatctgcctgccgcaccggcaccggtggttgtttcgatggag
actgtgcgtaaacccgtcctccatcaattgcaggtcaatgcctga
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