Planctopirus limnophila: Plim_3486
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Entry
Plim_3486 CDS
T01225
Name
(GenBank) glutaminyl-tRNA synthetase
KO
K01886
glutaminyl-tRNA synthetase [EC:
6.1.1.18
]
Organism
plm
Planctopirus limnophila
Pathway
plm00970
Aminoacyl-tRNA biosynthesis
plm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
plm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Plim_3486
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
plm01007
]
Plim_3486
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
plm03016
]
Plim_3486
Enzymes [BR:
plm01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.18 glutamine---tRNA ligase
Plim_3486
Amino acid related enzymes [BR:
plm01007
]
Aminoacyl-tRNA synthetase
Class I (A)
Plim_3486
Transfer RNA biogenesis [BR:
plm03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Plim_3486
Prokaryotic type
Other AARSs
Plim_3486
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1c
tRNA-synt_1c_C
tRNA-synt_1c_C2
Motif
Other DBs
NCBI-ProteinID:
ADG69299
UniProt:
D5SV13
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All DBs
Position
4508032..4509729
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AA seq
565 aa
AA seq
DB search
MSTDPTTPPAAPTNFIHEIIDGHNASGRFGGKVHTRFPPEPNGYLHIGHAKSICLNFGIA
KKYGGKCNLRFDDTNPTKEDIEYVNSIQEDVRWLGFEWDGLYYASDYFEQIYQWAELLIE
KGKAYVDSSTLDEIREQRGTVTQPGIANQYRSRSVKENLDLFRRMRAGEFPDGAHVLRAK
IDMAHTNMLLRDPVIYRIRHAHHHRTGDAWCLYPMYDFAHGYSDSIEGITHSICTLEFEI
HRPLYDWLIEAVGIYHPQQIEFARLNLTYTVMSKRKLLELVEAKIVSGWDDPRMPTIAGI
RRRGYTPAAMRDFCETIGVTRFNGMTDLVVLENAVRNDLNKSAPRVMGVLKPLKIVLTNY
PEGQTEEFDCINNPEDPSAGSRKVPFSRELYIERDDFMEDPPKQFFRLAPGREVRLRWAY
VIKCEEAVKDPATGEIVELRCTYDPETKGGNTPDGRKIKSTIHWVSAPHALSTEVRLYSP
LFSVEDLASIPETEDWKTYLSPTSLVVIPDAKLEPSVKTQAVGYRCQFERLGYFCLDRDS
TSEKLVFNRTVTLKDEWAKIQKKGG
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacggatccgacaactcctcccgccgcccctaccaacttcatccacgagatcatc
gatggccataacgcctcggggcgcttcggcggaaaagtgcacacccgctttccaccagaa
cccaatggctacctgcacattggccacgccaagtcgatctgcctgaacttcggcatcgcc
aaaaagtacggcggcaaatgcaatctccgcttcgacgacacgaaccccaccaaagaagac
atcgagtacgtcaactcgattcaggaagacgtccgctggctgggctttgaatgggacggc
ctgtactacgccagcgattacttcgaacagatctaccagtgggcggaattgctcattgaa
aagggtaaggcatatgtcgacagctcgacactcgacgagattcgcgaacagcgcgggaca
gtgactcagcctggtatcgcgaatcagtatcgcagtcggtcggtcaaggaaaacctggat
ctcttccgccgcatgcgggccggtgaattcccggatggtgcgcatgtgctgcgggcgaag
atcgatatggcccataccaacatgctgctgcgcgacccggtcatctatcgcatccggcac
gcccaccatcaccgcacaggggatgcctggtgtctgtacccgatgtacgacttcgctcat
ggttacagcgattccatcgaagggatcactcattcgatctgcacgctcgaatttgaaatc
caccggccactctacgactggctgattgaagccgtcgggatctatcacccccagcagatc
gagtttgcccggctgaatctcacttacaccgtgatgagcaagcgcaaattgctcgaactg
gtcgaggcgaagattgtcagcggctgggacgacccccgtatgcccaccatcgccggtatc
cgccggcgcggctacacaccggctgcgatgcgcgacttctgcgaaacgatcggcgtcacc
cgctttaacgggatgaccgatctcgtggtgctggagaatgccgtccggaatgatttgaac
aaatccgccccgcgtgtgatgggtgtgttgaaaccgctcaagatcgtgctgacgaactat
cccgaaggtcagaccgaagagttcgactgcatcaataacccggaagatccgtcggctggc
agccggaaggtgccgttcagccgggagttgtatatcgagcgggatgactttatggaagat
ccccccaagcagttcttccgtctggcccccggccgggaagtgcggctgcgctgggcctat
gtcatcaagtgcgaagaggcggtcaaggatcccgcgacgggcgagatcgtcgagctgcgc
tgcacttatgatcctgagaccaagggagggaacacacccgacggaaggaagatcaaatcg
acgatccactgggtctcggccccgcacgccttgagcacggaagtgcggctctacagcccg
ctcttcagtgtcgaggatctggcctcgatccccgagaccgaggactggaagacctacctc
agcccgacgtcgctggtggtaatccccgatgcgaagctggaaccttcggtgaagacgcaa
gccgtcggctaccgctgccaattcgaacgcctcggctacttctgcctcgaccgcgacagc
acgagcgaaaagctggtcttcaaccgcaccgtgacgttgaaggatgaatgggccaagatc
cagaagaagggcggttga
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