Planctopirus limnophila: Plim_4213
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Entry
Plim_4213 CDS
T01225
Name
(GenBank) FAD dependent oxidoreductase
KO
K15461
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:
2.1.1.61
1.5.-.-]
Organism
plm
Planctopirus limnophila
Brite
KEGG Orthology (KO) [BR:
plm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
plm03016
]
Plim_4213
Enzymes [BR:
plm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.61 tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase
Plim_4213
Transfer RNA biogenesis [BR:
plm03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
Plim_4213
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Motif
Pfam:
DAO
Pyr_redox_2
FAD_binding_2
NAD_binding_8
Motif
Other DBs
NCBI-ProteinID:
ADG70021
UniProt:
D5SZC0
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All DBs
Position
5385967..5387079
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AA seq
370 aa
AA seq
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MSETTVDLLIVGQGVAGSALAWQALRRHLKIHVISSPTEWPPSASQVGAGLITPITGSRL
ALAWRFAEFRSSALDLYRFVAHETKRDCWRNRPALRWLTIADEELWLSRCQKFPASANYL
QPVEPDLVTSREHGIHGPAGSKPYVMPEAARVLMPVFLEATKRWLTETSCLSRAEFKPLD
LIWDDVARHWKWRSMTARHIVFCTGYTPQLIRLPFLAAKGELMEIDLPGARQDYSWHGGI
WMTPQEQDRWLVGATYDPLHLDQEITSEARLELSLGLAQWGIRNPKICSQHAAIRPALPG
QMPAIGWSLPESILGRISEVTWPREKNCGVINGLGSRGALWAPLLADWLLDAMAGQPLPP
EINLTRFLRS
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgaaacgaccgttgatctgctgattgttggtcaaggtgtcgcaggatcggctctc
gcctggcaggcactgcgtcgccatctgaaaattcatgtcatcagttcaccgactgaatgg
ccaccttcggcctctcaagtgggagcaggactgatcacaccgatcaccggctccaggtta
gcactggcctggcgttttgcagaatttcgatcgtcggctttggatctttatcgttttgtg
gcccacgagaccaaacgagactgctggcgaaatcgacccgccctgcgctggttgacgatc
gccgacgaagaactgtggttatcgcgctgccagaagtttcccgcatcagccaactatctc
caacccgtcgaaccggatctcgtcacttcgcgagaacatggcatccatgggccagctggt
tcaaaaccttatgtcatgccagaggcggcccgggtgctcatgcctgtctttctggaggca
acaaagaggtggctgacggaaacatcctgtctttcacgagcggaattcaagcctctcgat
ctgatctgggatgacgtggcgcgtcattggaaatggagatcgatgaccgcccggcacatc
gtcttttgcactggctacactccacaattgatccggctgccatttctcgctgccaaaggg
gagttaatggaaatcgaccttccgggggctcgccaggattattcctggcatggagggatc
tggatgacaccacaagagcaggatcgctggctggtcggcgcaacctacgacccattgcat
ctggatcaggaaatcacatctgaggctcgtctggagttaagcctgggtctcgcacagtgg
ggaatcagaaatccaaaaatctgctctcagcacgccgccatcaggcccgctctccctggt
cagatgccagcgattggctggagcctgccagaatccattctcgggagaatctcagaggta
acctggccacgggaaaagaactgcggggtgatcaacggactgggttcacgtggtgctcta
tgggctccactgctggccgactggttactcgacgcgatggcaggccaaccccttcctcca
gaaatcaatctgacccggtttctgaggtcttga
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