Perognathus longimembris pacificus (Pacific pocket mouse): 125344289
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Entry
125344289 CDS
T08928
Symbol
Ret
Name
(RefSeq) proto-oncogene tyrosine-protein kinase receptor Ret
KO
K05126
proto-oncogene tyrosine-protein kinase Ret [EC:
2.7.10.1
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04010
MAPK signaling pathway
plop04020
Calcium signaling pathway
plop04151
PI3K-Akt signaling pathway
plop05200
Pathways in cancer
plop05216
Thyroid cancer
plop05223
Non-small cell lung cancer
plop05230
Central carbon metabolism in cancer
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
125344289 (Ret)
04020 Calcium signaling pathway
125344289 (Ret)
04151 PI3K-Akt signaling pathway
125344289 (Ret)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
125344289 (Ret)
05230 Central carbon metabolism in cancer
125344289 (Ret)
09162 Cancer: specific types
05216 Thyroid cancer
125344289 (Ret)
05223 Non-small cell lung cancer
125344289 (Ret)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
plop01001
]
125344289 (Ret)
Enzymes [BR:
plop01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
125344289 (Ret)
Protein kinases [BR:
plop01001
]
Receptor tyrosine kinases (RTK)
RET family
125344289 (Ret)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
RET_CLD4
RET_CLD1
RET_CLD3
Pkinase
Cadherin
RIO1
Pkinase_fungal
Haspin_kinase
ABC1
Motif
Other DBs
NCBI-GeneID:
125344289
NCBI-ProteinID:
XP_048192918
LinkDB
All DBs
Position
2:61085547..61130908
Genome browser
AA seq
1112 aa
AA seq
DB search
MAKATSGASRLRLLLLLPLLGEAPLGLYFSRDAYWEQLYLDQPAGMPLLYVQALRDTPDE
VPSYHLGQHLYGAYRTRLHENDWIRIQEDTGLLYLNQTLDHSSWEKLSIRNGGYPLLTVF
IQIFLSSLPVREGECQWPACARVYFSFINASFPPCSSLTARQLCFPETGLSFRIRENRPS
GTFHQFRLLPVQFLCPNISVAYRLLEGENLPFQCTPDSMEVSTRWSLDREQQEKYELVAE
CVVHTGAREEKVMAPFPVTVYDEDDSPPTFPSGVDTTSAVVEFKRKEGTVLATLRVFDAD
VVPASGELVRRYTSLLLTGDPWAQQTFRVEHSPNETLAQTNNSFVRATLHDYKLVLNRTL
PISESRVLQLAVLVNDSDFQGPGSGVVILHFNISVLPVSLHLPSTYSFSMSRRAHRYAQI
GRVCVENCQEFSGIQVQYKLQASSTNCSALGVVTSAEDTSGTLFVNDTEALRQPECGELQ
YTVVATDRHTRRQAQALLLLAVQGTYVTEEVGCPRSCAVSKRRSECEECGGLGSPTGRCE
WRQGDGKGITRNFSTCSPSTRTCPDGHCDAVEIRDINICPQDCLRGSIVGGHEPGERRGI
KAGYGICNCFPEEKKCFCEPEDHQGPLCDELCRTVIAAAVLFSFIVSILLSTFCIHRYHK
HAHKPSIPSAEMTFCRPAQAFPVSYSSSGARRPSLDSMENQVSVDTFKIPEDPKWEFPRK
NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASPSELRDLLSEFNLLKQV
NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRSFLRDSRKVGPSYVGSGGSRNSSSLDHPD
ERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEE
DSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFN
LLKIGHRMERPDNCSEEMYSLMLQCWKQEPDKRPVFADISKDLEKMMVKSRDYLDLAAST
PSDSLLYDDGLSEEETPLVDCNQAPLPRTLPSTWIENKLYGMSDPNWPGESPVPLTPSAV
TNTGFPRYANDSVYANWMVSPSAAKLMDTIDS
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaagcgacgtccggcgcctcccggctgcggctgctcctgctgctgccgctgctg
ggcgaagcccctctaggcctctacttctccagagatgcttactgggagcagctgtacctg
gaccaaccggctggcatgcccttgctctatgtccaagcccttcgggacacgcccgatgag
gtgcccagctaccacctgggccagcatctctacggggcctaccgcacaaggctgcatgag
aatgactggatccggatccaggaggacactggccttctgtacctcaaccagaccctggac
cacagctcctgggagaaactcagcatccgaaatggaggctaccctctgctcacagtcttc
atccagatttttctgtcatctctgcccgtgcgtgagggtgagtgccagtggccagcctgt
gcccgcgtgtacttctccttcatcaatgcctccttcccaccttgtagctccctcacagca
cggcagctctgcttcccagagacaggcctctccttccgcatccgggagaataggccttct
ggaaccttccaccagttccgcctgctgcctgtccagtttctctgccccaacatcagcgtg
gcctacaggctcctggaaggtgagaatctgcccttccagtgcacaccggacagcatggag
gtgagcacgcgctggagcctggaccgggagcagcaggaaaagtacgagctggtggccgag
tgtgtggtgcacacgggcgcacgtgaggagaaggtcatggcacccttccctgtgacggtc
tacgatgaggacgactcaccgcccaccttcccctcaggagtggataccaccagtgccgtg
gttgagttcaagcggaaagagggcaccgtgctagcgaccctgcgtgtgtttgatgccgat
gtggtgccagcgtctggggagctggtgaggcggtacacaagccttctgctcaccggggac
ccctgggcccagcagaccttccgtgtggagcactctcccaatgagaccttggcccaaacc
aacaacagctttgtgagggccaccctacatgactacaagctggttctcaaccggaccctc
cccatctcagagagccgagtcctacaattggctgtgctggtcaatgactctgacttccag
ggcccaggctcaggggtcgtcatcctccacttcaacatctctgtgctacctgtcagcctg
cacctgcccagcacctactccttctccatgagcaggcgggctcatcgttacgctcagatt
gggagagtctgtgtggaaaactgccaggagttcagtggaatccaggtccagtacaagctt
caggcctccagcaccaactgcagtgccctgggcgtggtcacctctgctgaagacacctca
gggacgctgttcgtgaacgacactgaggcgctgcgacagcccgagtgcggggagctgcag
tacacggtggtagccaccgaccggcacacccgcaggcaggcgcaggccttgctcctcctt
gcggttcaggggacatatgtaactgaagaggtgggctgtccgcggtcctgtgcagtcagc
aagaggcgatctgagtgcgaggaatgtggtggcctgggttctccaacgggcagatgcgag
tggaggcagggagatgggaaagggatcacgaggaacttctctacctgctctcccagcact
aggacctgccctgacggtcactgtgacgctgtggagattcgggatatcaacatctgcccc
caggactgcctccggggcagtattgttgggggacatgagccaggtgagagacgagggatt
aaagccggctatggcatctgcaactgcttcccagaagagaaaaagtgcttctgtgagcca
gaggaccaccaaggcccactgtgtgatgagctgtgccgcacggtgattgctgctgctgtc
ctgttctccttcatcgtctccatcctgctgtccaccttctgtatccatcgctaccacaag
cacgcccacaagccatccatcccctctgccgagatgaccttttgtcgacctgcccaggcc
ttccctgtcagctactcttcatccggtgcccgccggccctcactggactccatggagaac
caggtgtcggtggataccttcaagatcccggaagatccaaagtgggagtttcctcgcaag
aacttagttctcgggaaaactctgggagaaggcgagtttggaaaagtggttaaggcaacc
gcctttcgcctgaagggcagagcggggtacaccacagtggccgtgaagatgcttaaagag
aacgcctcccccagtgaactgagggacctcctgtctgagttcaacctcctgaagcaagtc
aaccaccctcacgtcatcaagctgtatggagcctgcagtcaggatgggccacttctcctc
attgtggaatatgccaagtatggctccctgaggagtttcctgcgggacagtcgcaaggtg
gggccgagctatgtgggcagcggaggcagccggaactccagttccctggaccacccagac
gagcgagcactgaccatgggggacctcatctcctttgcctggcagatctccaggggaatg
cagtacctggcagaaatgaagctcgttcatcgggacttagcagccaggaacatcctggtg
gctgaggggaggaagatgaagatctctgactttggtctatctcgagatgtttacgaagaa
gattcctatgtaaagagaagcaagggccggattcctgtcaaatggatggcaatcgagtcc
ctttttgatcacatctataccacccaaagtgatgtatggtcctttggggttctgctgtgg
gaaattgtgaccctggggggcaacccctaccctggaattcctcctgagcggctcttcaac
cttctcaagattggccaccgcatggaaaggccagacaactgcagcgaggaaatgtattcc
ttgatgctacagtgctggaagcaggaaccagacaagaggccagtctttgccgacatcagc
aaagacctagagaagatgatggtgaagagcagagattacttggacctggctgcatctacg
ccatctgactcactgctttatgacgatggcctgtcggaggaggagacgcccttggtggat
tgtaatcaggcccccctcccgcgtacccttccctccacctggattgaaaacaaactctat
ggcatgtcagacccgaactggcctggagagagtcctgtaccacttacgccatcagctgtc
actaacacggggttcccaagatatgcaaatgatagtgtatatgctaactggatggtttca
ccctcagcggcaaaattaatggacacgattgatagttaa
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