Perognathus longimembris pacificus (Pacific pocket mouse): 125346507
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Entry
125346507 CDS
T08928
Symbol
Polr3a
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1 isoform X1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03020
RNA polymerase
plop04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
125346507 (Polr3a)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
125346507 (Polr3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plop03021
]
125346507 (Polr3a)
Enzymes [BR:
plop01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
125346507 (Polr3a)
Transcription machinery [BR:
plop03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
125346507 (Polr3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Bac_DNA_binding
Motif
Other DBs
NCBI-GeneID:
125346507
NCBI-ProteinID:
XP_048195086
LinkDB
All DBs
Position
2:complement(52045890..52098402)
Genome browser
AA seq
1390 aa
AA seq
DB search
MVKEQFRETDVAKKISHICFGMKSPEEMRQQAHIQVVSKNLYSQDNNHAPLLYGVLDHRM
GTSEKDRPCETCGKNLADCLGHYGYIDLELPCFHVGYFRAVIGILQMICKTCCHIMLSKE
EKQQFLDYLKRPGLTYLQKRGLKKKISDKCRKKNICHHCGASNGTVKKCGLLKIIHEKYK
TTKKVVDPIVSSFLQSFETAIEHNKEVEPLLGRAQENLNPLIVLNLFKRIPAEDIPLLLM
NPEAGKPSDLILTRLLVPPLCIRPSVVSDLKSGTNEDDLTMKLTEIIFLNDVIKKHRISG
AKTQMIMEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKR
VDFSGRTVISPDPNLRIDEVAVPVHVAKILTFPEKVNKANINFLRQLVRNGPDVHPGANF
IQQRHTQMKRFLKYGNREKMAQELKFGDIVERHLIDGDVVLFNRQPSLHKLSIMAHLARV
KPHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEAKAEALVLMGTKANLVTPRNGEPLIA
AIQDFLTGAYLLTLKDTFFDRAKACQIIASILVGKDEKIKVRLPPPTILKPVTLWTGKQI
FSVILRPSDDNPVRANLRTKGKQYCGKGEDLCINDSYVTIQNSELMSGSMDKGTLGSGSK
NNIFYILLRDWGQNEAADAMSRLARLAPVYLSNRGFSIGIGDVTPGQGLLKAKYELLNAG
YKKCDEYIEALNTGKLQQQPGCTAEETLEALILKELSVIRDHAGSACLRELDKSNSPLTM
ALCGSKGSFINISQMIACVGQQAISGSRVPDGFENRSLPHFEKHSKLPAAKGFVANSFYS
GLTPTEFFFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLCSQYDLTVRSSTGDIIQF
IYGGDGLDPAAMEGKDEPLEFKRVLDNIKAVFPCQSEPALSKNELTLTTESIMKKNEFLC
CQDSFLQEIKKFIKGVSEKIKKTRDKYGINDNGTTEPRVLYQLDRITPTQIEKFLETCRD
KYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASMNITLGVPRIKEIINASKAI
STPIITAQLDKDDDADYARLVKGRIEKTLLGEISEYIEEVFLPDDCFILIKLSLERIRLL
RLEVNAETVRYSICTSKLRVKPGDVAVHGEAVVCVTPRENSKSSMYYVLQFLKEDLPKVV
VQGIPEVSRAVIHIDEQSGKEKYKLLVEGDNLRAVMATHGVKGTRTTSNNTYEVEKTLGI
EAARTTIINEIQYTMINHGMSIDRRHVMLLSDLMTYKGEVLGITRFGLAKMKESVLMLAS
FEKTADHLFDAAYFGQKDSVCGVSECIIMGIPMNIGTGLFKLLHKANRDPEPPRRPLIFD
TNEFHIPLVT
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggagcaattccgggagacggatgtggccaagaaaataagccacatctgtttt
ggaatgaagtctcccgaggagatgcgccagcaggcacacatccaggttgtgagtaagaac
ctgtacagccaggacaacaatcatgcccccttgctgtatggggtgctcgatcacaggatg
ggcacgagtgagaaggaccgtccttgtgagacctgtgggaagaacttggctgactgtctg
ggccactatgggtacattgacctggagctgccgtgcttccacgttgggtacttcagagct
gtcattggcatcttgcagatgatctgcaaaacctgctgccacatcatgctgtccaaagaa
gagaagcagcagtttctggactacctgaagaggcccggcctgacctacctccagaagcga
ggcctgaagaagaaaatctcagacaagtgtcggaagaagaacatttgccaccactgtggg
gcctctaatggtactgtgaaaaagtgcggcttactgaagataattcatgaaaaatacaaa
accaccaaaaaagtggtggatcctattgtgtccagttttctccagtcctttgaaacggcc
attgagcataacaaagaagtagagcctctgctggggagagcacaggaaaacttgaatcct
ttgatagttctgaatttgttcaaacgaatcccagctgaagatattcctctccttctgatg
aacccagaagccggaaagccctcagatttgattctcacccggcttctggtgcctcccctg
tgtatcaggccctctgtcgtgagcgatttgaagtctggcaccaatgaagatgatctgaca
atgaaattgacagaaatcattttcctaaatgatgtcattaaaaagcatcgaatctctgga
gccaagacacagatgatcatggaagactgggatttcctgcagctgcagtgcgccctctac
atcaacagtgagctctcaggcattcccctcaacatggcgcccaagaaatggacccgtgga
tttgtccagcgtctgaaagggaaacagggtcgatttagaggcaatctgtcgggaaagaga
gtggatttttctggtagaacagtcatctcccctgaccccaacctccggattgatgaagta
gctgtacccgttcatgtggccaaaatcctaacttttcctgagaaggtgaacaaagcaaac
atcaattttctgaggcagctggttcgaaatggccccgatgtccacccaggagccaacttc
atccagcagagacatactcagatgaaaaggtttttaaaatatggaaatcgggaaaagatg
gctcaggaactcaagttcggtgacattgtagagagacatcttattgatggagatgtggtg
ctgttcaaccgacagccctcgctgcacaaactgagcatcatggctcacttggccagggtt
aagccccatcggaccttcagattcaacgagtgcgtgtgcacaccctacaatgcagacttc
gatggtgatgaaatgaaccttcatctgcctcagacagaagaagccaaagcagaggccctt
gttctcatggggaccaaagctaatcttgtaaccccacggaacggggagcccctcattgct
gccattcaggattttctaacaggtgcctatcttctcaccctcaaggacactttcttcgac
cgagccaaagcttgccaaatcattgcttcaatattagttggcaaagatgagaaaattaaa
gtgcgcctgccaccccctacgatattaaagcctgtcaccctgtggactgggaagcagatt
ttcagtgtcatcctcagacctagcgatgacaatcccgtgagggccaacctccgaaccaag
ggcaagcagtactgtggcaagggggaagacctctgcatcaacgattcctatgttacaatc
cagaacagcgagttgatgagtggtagcatggacaaaggaacgctggggtcagggtccaag
aacaatatcttctacattttgctgcgagactggggacagaatgaagctgctgacgccatg
tcacgcctcgccaggctggctcccgtctacctgtctaaccgcgggttctctattgggatc
ggtgatgtcacccctggccagggactgctgaaggccaagtatgagttgctgaatgccggc
tacaagaaatgcgatgagtacatcgaggccctgaacacaggcaagctgcagcagcagcct
ggctgcactgctgaggaaacactagaggccctaatcctgaaggaactgtctgtgatccga
gaccatgctggcagtgcctgcctccgagagctggacaagagcaacagccctctcaccatg
gccttgtgtggctccaaaggttccttcattaacatatcacagatgattgcctgtgtggga
cagcaagccatcagtggctctcgagtgccagatggctttgaaaacaggtccttacctcac
tttgaaaaacactcaaagctcccagctgccaaaggctttgtggccaatagcttttattct
ggtttaacaccaactgaattcttcttccacacaatggccggccgggaaggtcttgtcgac
acagccgtaaaaacagctgaaacaggatacatgcagagaaggctggtcaaatccctggaa
gacctttgctcccagtatgatctgacagtccgaagctccactggtgatattatccagttc
atctacgggggagatggcttagatcctgcagccatggaggggaaagatgagcctctggag
tttaaaagagttctggacaacatcaaggccgtgttcccgtgtcagagcgagcctgctctc
agtaaaaacgagctcacgctgaccactgagtccatcatgaagaagaacgagttcctctgc
tgccaggacagcttcctgcaggaaataaagaaattcattaagggggtttctgaaaagatc
aagaaaaccagagataaatatggcatcaatgataacggcacgacagagccccgagtgttg
taccagttggaccggatcactcccacccaaatagagaagtttctggagacctgtagagac
aagtacatgagggcacaaatggagccaggctccgcagtgggtgcgctctgtgcccagagc
attggcgagccaggcacccagatgaccctgaagactttccactttgcaggtgtagcctcc
atgaacatcaccctgggcgtgccccggatcaaagagatcatcaacgcctccaaggccatc
agcactccaattatcacagcacagctagacaaggatgacgatgcggattacgcccgcctc
gtgaaaggcagaattgagaaaaccctcctgggggagatttcagagtatattgaggaagta
tttcttcccgatgactgctttattctcatcaagctttccctggaacggatcagacttctg
agactggaagtgaacgccgagacagtgcgctactccatctgcacatccaagctgcgcgtg
aagccgggcgacgtggctgtccatggggaggctgtggtgtgtgtcacccccagagagaac
agcaagagctccatgtactacgtgctgcagttcctgaaggaggacctccccaaggtggtg
gtgcagggcatcccagaggtgtccagagctgtcatccacatcgacgagcagagcgggaag
gaaaagtacaaactcttggtggaaggcgataacctgcgagcagtcatggccacccatggt
gtgaagggcacccggaccacctctaataacacctatgaggtagagaaaacactgggcatc
gaggctgcccggaccaccatcatcaatgaaatccagtacacgatgatcaaccatggcatg
agcatcgaccgcaggcacgtgatgctactctccgacctgatgacctacaagggtgaagtc
ctgggcatcactaggtttggcctggccaagatgaaggagagcgtgctgatgctggcctcc
tttgagaagacggctgaccatctctttgacgcagcctactttggacagaaggactcggtg
tgcggggtgtcagagtgcatcatcatgggaatccccatgaacatcggcactggcctcttc
aagctgctccacaaggccaacagggacccagagcctcccaggagacccctgatcttcgac
acaaatgagttccacatcccccttgtcacatag
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integrated database retrieval system
