Perognathus longimembris pacificus (Pacific pocket mouse): 125349917
Help
Entry
125349917 CDS
T08928
Symbol
Cps1
Name
(RefSeq) carbamoyl-phosphate synthase [ammonia], mitochondrial
KO
K01948
carbamoyl-phosphate synthase (ammonia) [EC:
6.3.4.16
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop00220
Arginine biosynthesis
plop00250
Alanine, aspartate and glutamate metabolism
plop00910
Nitrogen metabolism
plop01100
Metabolic pathways
plop01200
Carbon metabolism
plop01230
Biosynthesis of amino acids
Module
plop_M00029
Urea cycle
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
125349917 (Cps1)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
125349917 (Cps1)
00220 Arginine biosynthesis
125349917 (Cps1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
plop01002
]
125349917 (Cps1)
Enzymes [BR:
plop01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.16 carbamoyl-phosphate synthase (ammonia)
125349917 (Cps1)
Peptidases and inhibitors [BR:
plop01002
]
Cysteine peptidases
Family C26: gamma-glutamyl hydrolase family
125349917 (Cps1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
GATase
CPSase_sm_chain
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
ATPgrasp_Ter
ATP-grasp_3
Peptidase_C26
Motif
Other DBs
NCBI-GeneID:
125349917
NCBI-ProteinID:
XP_048200136
LinkDB
All DBs
Position
4:complement(21811964..21913725)
Genome browser
AA seq
1500 aa
AA seq
DB search
MTRILTACRVVKSLKNGFGLANVAVQRQSKFSKPGIRLLSVKAQTAHIVLEDGTKMKGYS
FGHPSSVAGEVVFNTGLGGYPEALTDPAYKGQILTMANPIIGNGGAPDTTALDELGLSKY
MESDGIKVSGLLVLNYSNDYNHWLATKSLSQWLQEEKIPAIYGVDTRMLSKIIRDKGTML
GKIEFEGQPVDFVDPNKQNLIAEVSTKNVKVFGKGNPTKVVAVDCGIKNNVIRLLVKRGA
EVHLVPWNHDFTQMEYDGLLIAGGPGNPALAQPLIQNVKKILESDRKEPLFGISTGNLIT
GLAAGGKSYKMSMPNRGQNQPVLNVTNRQAFITAQNHGYALDQTLPPGWKPLFVNVNDQT
NEGIMHESKPFFAVQFHPEVSPGPTDTEYLFDSFFSLIKKGKGTTVTSVLPKPALVASRV
EVSKVLILGSGGLSIGQAGEFDYSGSQAVKAMKEENVKTVLMNPNIASVQTNEVGLKQAD
AVYFLPITPQFVTEVIKAERPDGIILGMGGQTALNCGVELFKRGVLKEYGVKVLGTSVES
IMATEDRQLFSDKLNEINEKIALSYAVESMEDALKAADTIGYPVMIRSAYALGGLGSGIC
PNRETLIDLGTKAFAMTNQILVERSVTGWKEIEYEVVRDADDNCVTVCNMENVDAMGVHT
GDSVVVAPAQTLSNAEFQMLRRTSINVVRHLGIVGECNIQFALHPTSMEYCIIEVNARLS
RSSALASKATGYPLAFIAAKIALGIPLPEIKNVVSGKTSACFEPSLDYMVTKIPRWDLDR
FHGTSSRIGSSMKSVGEVMAIGRTFEESFQKALRMCHPSVDGFTPRLPMNKEWPSNLDLR
KELSDPSSTRIYAIAKAIQDNMSLDEIVKLTSIDKWFLYKMRDILNMEKTLKGLKSESVS
EETLRKAKEIGFSDKQISKCLGLTEAQTRELRLKKNIHPWVKQIDTLAAEYPSVTNYLYV
TYNGQEHDVKFDDHGLMVLGCGPYHIGSSVEFDWCAVSSIRALRQLGKKTVVVNCNPETV
STDFDECDKLYFEELSLERILDIYQQEACGGCIISVGGQIPNNLAVPLYKNGVKIMGTSP
LQIDRAEDRSIFSAVLDELKVAQAPWKAVNTLNEALDFANSVGYPCLLRPSYVLSGSAMN
VVFSDDEMKKFLEEATRVSQEHPVVLTKFVEGAREVEMDAVGKDGRVISHAISEHVEDAG
VHSGDATLMLPTQTISQGAIEKVKDATRKIAKAFAISGPFNVQFLVKGNDVLVIECNLRA
SRSFPFVSKTLGVDFIDVATKVMIEENIDEQHLPTLERPIIPADYVAIKAPMFSWPRLRD
ADPILRCEMASTGEVACFGEGIHTAFLKAMLSTGFKIPQKGILIGIQQSFRPRFLGVAEQ
LHNEGFKLFATEATSDWLNANNVPATPVAWPSQEGQNPSLSSIRKLIRDGSIDLVINLPN
NNTKFVHDNYVIRRTAVDSGIALLTNFQVTKLFAEAVQKSRNVDSKSLFHYRQYSAGKAA
NT seq
4503 nt
NT seq
+upstream
nt +downstream
nt
atgacgaggattttgacagcgtgcagagtggtgaagagcctgaagaatggctttggtctt
gccaatgtggctgtgcagcggcagtcaaaattttccaaacctggcatcaggctcctttct
gtcaaggcacagacagcacatattgttctggaagatggaactaaaatgaaaggttactcc
tttggccatccatcctctgttgctggtgaagtggtctttaatacaggcctgggagggtac
ccggaagcgcttacagaccccgcctacaaggggcagattctcactatggccaaccctata
attgggaatggtggggctccagacaccacagcgcttgatgaactgggactcagcaagtac
atggaatctgatggaataaaggtttctggtctgctggtgctgaattacagcaatgactac
aaccactggttggctaccaagagtctctcacagtggctgcaggaggagaagattcctgca
atttatggagtagacacaagaatgctgagtaaaattattcgagataagggcaccatgctt
gggaagattgaatttgaaggtcagcctgtggattttgtggatcctaataagcagaatttg
attgctgaggtatcaaccaagaatgtcaaagtgtttggcaaaggaaaccccacaaaagtg
gtagctgtggactgtgggatcaaaaacaatgtcatccgtctgcttgtaaagcgcggagct
gaagtgcatttggttccttggaatcatgatttcacccagatggagtatgatggacttctg
attgctggaggccctgggaacccagctcttgcacaaccactgattcagaatgtcaaaaag
attctggagagtgatcgcaaagagccattgtttggtatcagtacagggaatctcataaca
ggattggctgcgggtggcaaatcctacaagatgtccatgcccaatagagggcagaatcag
cctgttttgaatgtcacaaacagacaggctttcattactgctcagaatcatgggtatgct
ctggaccagaccctccctcctggctggaaaccactgtttgtgaatgtcaatgatcaaaca
aacgaggggattatgcatgagagcaagccctttttcgctgtgcagttccacccagaggtc
agcccagggccaacagacactgagtacctctttgattcctttttctccctgataaagaag
gggaaaggtaccactgttacatcagtcctgccaaagccagctctggttgcatctagagtt
gaggtttccaaagtcctgatcctcgggtcaggaggtctgtccattggtcaggcaggtgaa
tttgattactccggatctcaagctgtaaaagccatgaaggaagaaaatgtcaaaacagtc
ctgatgaacccaaatattgcatctgtccagaccaacgaggtgggcttgaagcaggcagat
gctgtctacttccttcccatcaccccccagtttgtcactgaggtcatcaaggcagaacga
ccagatgggatcattctaggcatgggtggccagacagctctcaactgtggtgtggaatta
ttcaagagaggtgtgctcaaggaatatggtgtgaaagtcttgggaacttcagtagaatcc
attatggccacagaagacagacagctgttctcagacaaactcaatgagatcaatgaaaag
attgctctgagttatgctgtggaatcaatggaggatgccctgaaggctgccgacaccatt
ggataccctgtgatgattcgttctgcttatgcactgggtggattgggctctggcatttgt
cccaacagagaaaccttaatagaccttggcacaaaagcttttgctatgaccaaccagatt
ctggtggagagatcagtgacaggctggaaagaaatagaatatgaagtggtccgagatgct
gatgacaattgtgtcactgtgtgtaacatggagaatgttgatgccatgggtgttcataca
ggtgattcggttgtggtggcccctgcccagacactgtccaatgcagagtttcaaatgttg
agacgcacttcaatcaatgttgtccgccacttgggcattgtgggtgaatgcaacattcag
tttgctcttcaccctacctcaatggaatactgcatcattgaagtaaatgccagactgtct
cgaagttctgctctggcctcaaaggccactgggtacccactggcgttcattgcagcaaag
attgccctaggaattccacttcctgaaatcaagaacgttgtgtctgggaagacatctgcc
tgctttgaacccagcctggattacatggttaccaagattccacgctgggaccttgaccgt
ttccatggcacatctagccggattggtagctccatgaagagtgtgggagaggtcatggct
attggtcgaacttttgaggaaagcttccagaaagctctgagaatgtgccacccatcggtg
gatggcttcactccccgattgccaatgaacaaagaatggccatccaacctggatctcaga
aaagagctctctgatccttccagcacccgcatctatgctattgccaaggccatacaagac
aacatgtctcttgatgagattgtgaagcttacttccattgacaagtggttcttgtataag
atgcgtgacattttaaacatggaaaagaccctgaaaggactcaagagtgagtcagtttca
gaggaaaccctgagaaaggccaaggagattgggttctcagacaaacagatttcaaaatgc
ctaggattgactgaggcccagacacgggagctgaggttaaagaaaaacatccacccatgg
gtgaaacagattgatacactggctgcagaatatccatcagtaacaaattacctgtatgtt
acctacaatggtcaggaacatgatgtcaagtttgatgaccacggcctgatggtgctgggc
tgtggtccatatcacattggaagcagtgtggaatttgattggtgtgctgtctccagcatc
cgcgcactgcgtcagcttggcaagaaaactgtggtagtgaattgcaaccctgagactgtg
agcactgactttgatgagtgtgacaaactgtacttcgaagagctgtctttggagagaatc
ctagacatctaccaacaggaggcatgtggtggctgcatcatatctgttgggggccagatt
ccaaataatctggcagtcccgctgtacaagaatggtgtgaagatcatgggcacaagtcct
ttgcagatcgacagggctgaggatcgctccattttctctgctgtcttggatgaactgaag
gtggcccaggcaccatggaaagctgttaacactttgaatgaagctctggattttgccaac
tctgttggctacccctgcttgctgagaccttcttatgttctgagtggttctgccatgaac
gtggtgttttctgatgatgagatgaagaagttcctagaggaggccacgcgagtctctcag
gagcacccagtggtgttgacaaaatttgttgagggggcccgggaagttgaaatggatgct
gttggtaaagatggaagggtcatctcccatgccatctctgaacacgttgaggatgccgga
gtccactcaggagatgccactctgatgctgcccacacagaccatcagccagggagccatt
gaaaaggtgaaggatgctacccggaagattgccaaggcttttgccatctctggcccgttc
aatgtccagtttcttgtcaaaggaaatgatgtcttggtgattgaatgcaacttgagagct
tctagatccttcccatttgtttcgaagacccttggggtagactttattgatgtggccaca
aaggtcatgattgaagagaacattgatgagcaacaccttcccacattggaacggcccata
attccagctgactatgtggcaattaaggctcccatgttttcttggccccggttgagggat
gctgaccccattctgagatgtgagatggcctccactggagaggtggcttgctttggtgaa
ggtattcatacagccttcctaaaggcaatgctttcgactggatttaagataccacagaaa
ggcattctgattggaatccagcaatcattccgtccaagattccttggtgttgctgagcaa
ttacacaatgaaggtttcaagctctttgccacagaagccacatcagactggcttaatgcc
aacaatgttcctgccacccccgtggcttggccatctcaggaagggcagaacccaagtctc
tcttccatcagaaaattgataagagatggcagcattgaccttgtgattaacctccccaac
aacaacaccaagtttgtccatgataattatgtgatccggaggacagctgttgacagtgga
attgctcttctcactaatttccaggtgaccaaactttttgcggaagctgtgcagaaatct
cgtaatgtggactccaagagtcttttccactacaggcagtacagtgctggaaaagcagca
tag
DBGET
integrated database retrieval system
