Perognathus longimembris pacificus (Pacific pocket mouse): 125351358
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Entry
125351358 CDS
T08928
Symbol
Prdm6
Name
(RefSeq) putative histone-lysine N-methyltransferase PRDM6
KO
K20795
[histone H4]-lysine20 N-methyltransferase PRDM6 [EC:
2.1.1.361
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop00310
Lysine degradation
plop01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
125351358 (Prdm6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plop03000
]
125351358 (Prdm6)
03036 Chromosome and associated proteins [BR:
plop03036
]
125351358 (Prdm6)
Enzymes [BR:
plop01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.361 [histone H4]-lysine20 N-methyltransferase
125351358 (Prdm6)
Transcription factors [BR:
plop03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
125351358 (Prdm6)
Chromosome and associated proteins [BR:
plop03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
125351358 (Prdm6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-H2C2_2
zf-C2H2_4
SET
zf-C2H2_jaz
Zap1_zf1
zf-C2H2_11
Motif
Other DBs
NCBI-GeneID:
125351358
NCBI-ProteinID:
XP_048201997
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All DBs
Position
5:87415740..87521487
Genome browser
AA seq
580 aa
AA seq
DB search
MLKPGEPGGSAFLKVDPAYLQHWQQLFPHGGGGGPLKGGGPAGPLGAPPPPERAEPPPDG
LRPRPAALSAAASAPAAAAAPAVSSCAAAAAAAALAGLSSLPVAQLPVFAPLAVAAVAAE
PLPHPDPSLRAASGPGPAAGGGGDGRGAPRFRCSAEELDYYLYGQQRMEIIPLNQHAGDP
NNRCDMCADNRHGECPMHGPLHSLRRLVGTSSAAAAAPPPELPEWLRDLPREVCLCTSTV
PGLAYGICAAQRIQQGTWIGPFQGVLLPPEKVQAGALRNTQHLWEIYDQDGTLQHFIDGG
EPSKSSWMRYIRCARHCGEQNLTVVQYRSNIFYRACIDIPRGTELLVWYNDSYTSFFGIP
LQCIAQDENLNVPSSVMEAMCRPDALQPFGKSSKLAAAAPQRSVVFPQTPCSRGSSLLDK
SGALESGFNQLNVKNQRVLASPTSTSQLHSEFSDWHLWKCGQCFKTFTQRILLQMHVCTQ
NPDRPYQCGHCSQSFSQPSELRNHVVTHSSDRPFKCGYCGRAFAGATTLNNHIRTHTGEK
PFKCERCERSFTQATQLSRHQRMPNECKPITESPESIEVD
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagcccggagagcccggcggctcggccttcctcaaggtggacccagcctacctg
cagcactggcagcagctcttccctcacggcggcggcggcggcccgctgaagggcggcggc
cccgcgggccccctgggcgcgccgccgcccccggagcgcgccgagcccccgccggacggc
ctgcgcccgcggcccgccgcgctctccgccgccgcgtccgccccggccgccgccgccgcc
cccgccgtgtcctcctgcgccgcggccgcggcggccgccgccctggcggggctctcgagc
ctgccggtggcgcagctgcccgtgttcgcgccgctcgccgtggccgccgtggccgccgag
ccgctgccccacccggacccgagcctccgcgcggcctcgggccccgggccggccgcgggc
ggcggcggggacggccgcggcgccccgcgcttccgctgcagcgccgaggagctggactat
tacctgtacggccagcagcgcatggagatcatcccgctcaaccagcacgccggcgacccc
aacaaccgttgcgacatgtgcgcggacaaccgccacggcgagtgccccatgcacggcccc
ctgcactccctccgccggctggtgggcaccagcagcgccgcggccgccgcgcccccgccc
gagctgcccgagtggctgcgggacctgccccgggaggtgtgcctgtgcaccagcaccgtg
cccggcctggcctacggcatctgcgcggcgcagaggatccagcagggcacctggatcggc
cccttccagggggtgctgctgccccccgagaaggtgcaggcgggcgccctgaggaacacg
cagcacctctgggagatatatgaccaagatgggacactacagcactttattgatggtggg
gaacctagtaagtcgagctggatgaggtatatccggtgtgcaaggcactgtggagagcag
aatctaacagtagttcagtacaggtcgaatatattctaccgagcctgtatagatatcccc
aggggcaccgagctcctggtgtggtacaatgacagctatacatctttctttgggatcccc
ttacagtgcattgcccaggatgaaaacttaaacgtcccttcctcggtcatggaagccatg
tgccggccagacgccctgcagcccttcggtaagagcagcaagctggccgccgccgccccg
cagcgctccgtggtcttcccccagacgccctgcagccggggctcctccctcctggataaa
tcgggggccctggagtcgggcttcaaccagctcaacgtgaagaaccagcgggtgctggcc
agcccgacctccacgagccagctgcactcggagttcagtgactggcacctgtggaagtgc
ggccagtgcttcaagaccttcacccagcgcatcctcctgcagatgcacgtgtgcacgcag
aacccggacagaccctaccagtgtggccattgctctcagtccttttcccagccttcagaa
ctgaggaatcacgtggtcactcactccagcgaccggcctttcaagtgtggctactgcggc
cgggcctttgcaggcgccaccaccctcaacaaccacatccgaacccacactggagagaag
cccttcaagtgcgagaggtgtgaaaggagcttcacgcaggccacccagctgagccgacac
caacggatgcccaatgagtgcaagccaataaccgagagcccagaatcaatcgaagtggat
taa
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integrated database retrieval system
