KEGG   Perognathus longimembris pacificus (Pacific pocket mouse): 125351465
Entry
125351465         CDS       T08928                                 
Symbol
Hlcs
Name
(RefSeq) LOW QUALITY PROTEIN: biotin--protein ligase
  KO
K01942  biotin---protein ligase [EC:6.3.4.9 6.3.4.10 6.3.4.11 6.3.4.15]
Organism
plop  Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop00780  Biotin metabolism
plop01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:plop00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00780 Biotin metabolism
    125351465 (Hlcs)
Enzymes [BR:plop01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.4  Other carbon-nitrogen ligases
    6.3.4.9  biotin---[methylmalonyl-CoA-carboxytransferase] ligase
     125351465 (Hlcs)
    6.3.4.10  biotin---[propionyl-CoA-carboxylase (ATP-hydrolysing)] ligase
     125351465 (Hlcs)
    6.3.4.11  biotin---[methylcrotonoyl-CoA-carboxylase] ligase
     125351465 (Hlcs)
    6.3.4.15  biotin---[biotin carboxyl-carrier protein] ligase
     125351465 (Hlcs)
SSDB
Motif
Pfam: BPL_LplA_LipB BPL_C BPL_N
Other DBs
NCBI-GeneID: 125351465
NCBI-ProteinID: XP_048202200
LinkDB
Position
5:5012917..5143377
AA seq 861 aa
MLITLCYLYLWARWGRAPAALVPGTVRRLRARCSFTFCAAAAQPGGARVCLRRGGRVFCV
GESQSIDDLNKWVLNLISPFRLQAEHIAFVTESIWVQGDNFQRRLSSETVVKWSDYCLPL
ACRPGDPYQFIAEASVDNFSKLGVAFMEDRLQMDNGLIPQKIVSVHLRDSILKELKDQAA
NGQAQGLEPATGPPPEPKPGQDAVGRAGSDEPRAPGQDSSKQPAGGDREHGEHSHLHLFS
CHECLELENSTIESVKFASAENIPDLPYDHSSGLEGVTDELCPKREESRVNMAGKAPNIL
IYVGASTREAVGRLEQVRSVVADCVDVDSYTIYHLPEDSALRDPWADNCLLLVVAALEPI
PKDLSQKFMAYLSQGGKVLALSSPFTFGGFQVTRKGTLQKTVQGLVFCKADRSEVRLSVL
SSGCVYEAGAGEHQPCRLHGHLDTEDKDRTIMQVPFGSCGGEAVLCQVHLELPPRSPTVQ
TQQDFDLLKSSNMRRYEVLQEILTALGISCEVRQVPALTPVSLLLATEEIRDPLMQWLGA
HVDPEGVIKSSKLSLKFVSSCASEVEVTPSSIPVVTDTEDFSSDHFNLEIYRQNLQTKQL
GKVILFAEVTPTTMNLLDGLMFEMPQEMGLIAIAVRQTQGKGRGPNAWLSPVGCALSTLL
ISIPLRSQLGQRIPFVQHLMSLAVVEAVRSVPKYQDINLRVKWPNDIYYSDLMKIGGVLV
NSTLLGETFYILIGCGFNVTNSNPTICINDLIAEHNRQHEAGLQPFRADHLIARAVTVLE
TLVHTFQDEGPQGVLPLYYKYWLHSGQQVRLGSTEGPQVSIVGLDDSGFLQVLGEDGRIV
TVHPDGNSFDMLRNLIVPKQQ
NT seq 2586 nt   +upstreamnt  +downstreamnt
atgctcatcacgctgtgctacctgtacctgtgggcgcgctgggggcgcgcgcccgcggcg
ctcgtgcccggcacggtgcggcggctgcgcgcgcgctgctccttcactttctgcgccgcg
gccgcgcagcccgggggcgcgcgcgtgtgcctgcgccgcggcggccgcgtcttctgcgtc
ggggagagccagtccatcgacgacttgaacaaatgggtgctgaatctcatctctcccttt
agacttcaagcagaacacatagcatttgtgacagagagcatttgggttcaaggtgacaat
ttccagaggcggttgtcttcagaaacagttgtcaagtggtctgactactgtttgccgtta
gcttgccgacctggggacccctaccagttcattgctgaagcaagtgtggacaatttcagc
aagctgggagtagcattcatggaagataggctccagatggataatgggctgatacctcaa
aagatcgtctcggtacacttgcgcgactccattctgaaggaactcaaggaccaggctgca
aatgggcaagcccaaggcctcgagccggccacagggcctcccccagagcccaagcctggg
caggatgcggtggggcgtgctggcagcgatgagcccagggctcctggccaagactcctcc
aagcagccggcaggaggggacagggagcacggagagcattcccacctccacctgttcagt
tgccacgagtgtttggaactggagaacagcaccatcgagtcagtaaagtttgcctctgca
gagaacattccagatcttccctatgaccacagcagtggtttggagggtgtcactgatgag
ctctgccccaaaagagaagagagcagagtcaacatggcgggcaaagcacccaacatccta
atctatgtgggtgccagcacccgggaagcggtgggccggctggagcaggttcgctccgtt
gtagccgactgtgtggacgtggacagctataccatctaccacctgccggaggacagcgcg
ctcagggacccgtgggccgacaactgcctcttgttggtggtcgctgccttggagcccatt
cccaaagacctgtcccagaagttcatggcctatctttctcagggagggaaggtgctggcc
ctgtcgtctccgttcacctttggtggctttcaggtgacacggaagggcacgctgcaaaag
acggtccagggcttggttttctgcaaggctgaccggagcgaggtgaggctcagcgtcctg
agcagcggctgtgtctacgaggcgggcgctggagagcatcagccctgccgactccacggc
cacctggacaccgaggacaaggacaggaccatcatgcaagtgcctttcggaagctgtgga
ggagaggccgttctttgtcaggtgcatctagaactacctccacgctctcccacagtgcaa
acccaacaagactttgatttgctcaagtcaagcaatatgagaagatacgaggtccttcag
gaaatcctgactgcccttggcatcagctgtgaggttcgacaagttcctgccttaacaccc
gtgtccttactgttggccaccgaggaaatccgagatccgcttatgcagtggctgggggca
catgtggatccagaaggagtaatcaagtccagcaagctctcccttaagtttgtgtcctct
tgtgcatctgaagtagaagtcaccccgtcttccatccctgtggttactgacacagaggac
ttctcttctgaccattttaacttagagatctatcggcaaaatctgcagaccaaacaactt
gggaaagtaattctgtttgctgaagtgaccccgaccaccatgaatcttctggatgggttg
atgtttgagatgccgcaggaaatgggtttaatcgccattgcagtccggcagacccagggc
aaagggcggggaccgaacgcctggctgagcccggtaggatgcgccctctccacgctgctg
atctccatcccgctgcggtcccagctggggcagaggattcctttcgtccagcacctgatg
tccctggcggtggtggaggccgtgcggtccgtgcccaagtatcaggatatcaacttacga
gtgaagtggcccaacgacatttattacagtgacctcatgaagattgggggagttctggtt
aactcaacacttctgggagaaacattttatatacttatcggctgcggattcaacgtcacc
aacagtaaccccacgatctgcatcaacgacctcatcgcagaacacaacaggcagcacgag
gccgggctgcagcccttccgagccgaccacctcattgccagggccgtgacggtgctggag
acactggtgcacacgttccaggatgaggggccccagggcgtgctgcccctctattacaaa
tactggctgcacagtggtcagcaggtccggctgggaagcacggaggggccgcaggtgtcc
atcgtgggcctcgacgattccggcttcctgcaggtgctcggggaggacggccggatcgtg
acggtgcaccccgacggcaactccttcgacatgctgaggaacctcattgtgcccaagcag
cagtag

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