Perognathus longimembris pacificus (Pacific pocket mouse): 125359097
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Entry
125359097 CDS
T08928
Symbol
Polr3b
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC2
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03020
RNA polymerase
plop04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
125359097 (Polr3b)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
125359097 (Polr3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plop03021
]
125359097 (Polr3b)
Enzymes [BR:
plop01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
125359097 (Polr3b)
Transcription machinery [BR:
plop03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
125359097 (Polr3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
125359097
NCBI-ProteinID:
XP_048212583
LinkDB
All DBs
Position
1:complement(11886965..11985390)
Genome browser
AA seq
1133 aa
AA seq
DB search
MDVLAEEFGNLTPEQLAAPIPTVEEKWRLLPAFLKVKGLVKQHIDSFNYFINVEIKKIMK
ANEKVTSDADPMWYLKYLNIYVGLPDVEESFNVTRPVSPHECRLRDMTYSAPITVDIEYT
RGSQRIIRNALPIGRMPIMLRSSNCVLTGKTPAEFAKLNECPLDPGGYFIVKGVEKVILI
QEQLSKNRIIVEADRKGAVGASVTSSTHEKKSRTNMAVKQGRFYLRHNTLSEDIPIVIIF
KAMGVESDQEIVQMIGTEEHVMAAFGPSLEECQKAQIFTQMQALKYIGNKVRRQRMWGGG
PKKTKIEEARELLASTILTHVPVKEFNFRAKCIYTAVMVRRVILAQGDNKVDDRDYYGNK
RLELAGQLLSLLFEDLFKKFNSEMKKIADQVIPKQRAAQFDVVKHMRQDQITNGMVNAIS
TGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLC
PSDTPEGEACGLVKNLALMTHITTDMEDGPIVKLASNLGVEDVNLLCGEELSYPNVFLVF
LNGNILGVIRDHKKLVNTFRLMRRAGYINEFVSISTNLTDRCVYISSDGGRLCRPYIIVK
KQKPAVTNKHMEELAQGYRNFEDFLHESLVEYLDVNEENDCHIALYEHTINKDTTHLEIE
PFTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIGYNQRNRIDTLMYLLAYPQKPMV
KTKTIELIEFEKLPAGQNATVAVMSYSGYDIEDALVLNKASLDRGFGRCLVYKNAKCTLK
RYTNQTFDKVMGPMLDAATRKPIWRHEILDADGICSPGEKVENKQVLVNKSMPTVTQIPL
EGSNVPQQPQYKDVPITYKGATDSYIEKVMISSNAEDAFLIKMLLRQTRRPEIGDKFSSR
HGQKGVCGLIVPQEDMPFCDSGICPDIIMNPHGFPSRMTVGKLIELLAGKAGVLDGRFHY
GTAFGGSKVKDVCEDLVRHGYNYLGKDYVTSGITGEPLEAYIYFGPVYYQKLKHMVLDKM
HARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISSDAFEVDVC
GQCGLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKLSKYNE
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atggacgttctggcggaagagtttgggaacctgaccccagagcagctggcggcgccgatc
ccaacggtcgaggaaaaatggaggctgcttccagcatttttaaaggtgaaaggccttgtg
aaacagcatatagactcattcaactatttcattaacgtggagataaagaagataatgaaa
gccaacgaaaaggttacgagtgatgctgacccaatgtggtacttaaaatatcttaatatt
tatgtcgggcttcctgatgttgaggaaagcttcaatgtaactagaccagtgtctcctcat
gagtgccgcttgagggacatgacgtactccgcccctattaccgtggacattgagtacacc
cgaggaagccagaggatcattcgaaatgccctacccataggcaggatgcccattatgctg
cgaagttccaactgcgttctgacagggaagacgccagcagaatttgcaaaactgaatgaa
tgtcctttagacccaggtggttacttcatcgtgaaaggagttgaaaaagtgattctcatc
caggagcagctctctaagaacaggatcattgtagaggccgatagaaaaggggccgtcgga
gcatctgttaccagctccacccatgaaaagaaaagcagaaccaacatggcagtaaagcaa
ggacggttctatctgaggcacaacacattatctgaagacatacccattgtgatcatattt
aaggccatgggtgtggagagtgaccaggaaattgtgcagatgattgggacagaggagcac
gtgatggccgcctttgggcccagtctggaggagtgccagaaagctcagattttcacacag
atgcaggcactcaagtatatagggaataaagtcagaagacaaagaatgtggggaggtgga
ccgaagaaaaccaaaatagaagaagcaagagagcttctggcttctaccattctgactcat
gttccagttaaagaatttaatttccgagccaaatgtatttatactgcggtgatggtgcga
agagtaatcttggctcaaggtgataacaaagttgatgaccgagactactatggtaacaag
cgattggaattagcaggacagcttttatctcttctttttgaagatttgttcaaaaaattt
aattctgagatgaagaagattgcggaccaggtgattcctaaacaaagagcagcccagttt
gacgtggtaaagcacatgcggcaggaccagatcaccaacggcatggtgaatgccatttct
actggaaattggtctctaaagagatttaaaatggaccgccaaggtgtgacccaggtgctg
tctcgcttgtcctatatatccgcactgggcatgatgacaagaatttcttcccagttcgaa
aaaacaagaaaagtgagtggtcctcgctccctccagccatctcagtggggaatgctctgc
ccttccgacacacctgaaggagaggcctgtggtttggttaaaaacttggccctaatgaca
cacatcacaactgacatggaagatgggcctattgttaagctagccagtaacctgggagtg
gaagatgtaaatttgctatgtggggaagaactttcttacccaaatgtgtttctcgtcttc
ctcaatggtaacatcctgggtgtcatccgggaccataaaaagctagtgaacacatttcgg
ctgatgcgaagagcgggatatatcaatgaatttgtttccatctcaacaaatcttacagac
cgatgcgtttatatttcctctgatggaggaaggctgtgcaggccttacataattgttaag
aaacagaagccagcagtcactaataagcatatggaagaattggctcaggggtacaggaat
tttgaagacttcttacatgaaagtctagttgaatatttagatgtgaatgaagaaaatgac
tgtcacatcgcactctatgaacacacaattaataaagataccacccacttggagattgaa
cccttcactcttcttggcgtctgtgctggcctcatcccatatcctcatcataaccagtcc
ccaagaaacacctaccagtgtgctatgggcaaacaagccatgggtaccattggatacaac
cagcgaaatagaatcgatactctcatgtatctactagcatatccacaaaaacccatggtt
aaaacaaaaaccattgagttgatagagtttgagaaattgccagctggacagaatgcgaca
gtcgctgtgatgagttacagtggctatgatattgaagatgcacttgttttaaacaaggcc
tccttggacagaggttttgggcgttgtcttgtatataaaaatgctaaatgtacattgaaa
cgatacaccaatcagacttttgataaagtgatggggcccatgttggatgctgctacaagg
aaacctatctggcgacatgaaatattagatgcagatggcatttgttctccaggtgagaag
gtagaaaacaagcaagtgcttgtaaacaagtccatgcccacagtgactcagattcccctg
gaaggaagcaacgtgccacagcaaccacagtacaaagacgtgcccatcacgtacaaaggg
gcaacagattcctacattgaaaaagtgatgatttcttccaatgctgaagatgcttttctg
atcaaaatgcttctgcggcagactaggcggcctgagattggagacaaattcagcagtcgt
catgggcaaaaaggtgtttgtggcttgatcgtcccccaggaagacatgccattttgtgat
tctggcatctgtccggacatcataatgaacccacacggcttcccatcaagaatgacggtg
ggaaagctgattgagctgttggccggcaaggcaggcgtgttggatggcaggttccactat
ggcactgcatttggaggaagtaaagtaaaggacgtgtgtgaggacctcgttcgccatggc
tataactacctggggaaggactacgtgacatcaggcatcacaggtgagcccttagaagca
tacatctacttcggccctgtgtactaccagaaactgaaacacatggtgctggataaaatg
catgcccgggcccggggaccacgtgccgtccttaccaggcagcccactgaggggcgatcc
cgtgatggcggcctgcgtctgggagaaatggaacgtgactgtttaatcggctatggagct
agtatgcttttgttggagagactaatgatttcaagtgacgcctttgaagttgatgtctgc
ggacagtgtggacttctgggatattctggctggtgccactactgcaagtcctcgtgccac
gtgtcctcccttcgcatcccctacgcctgcaagctgctcttccaggaactgcagtccatg
aacattatccccaggctcaagctgtccaagtacaacgagtga
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integrated database retrieval system
