Perognathus longimembris pacificus (Pacific pocket mouse): 125365908
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Entry
125365908 CDS
T08928
Symbol
Slc6a4
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04721
Synaptic vesicle cycle
plop04726
Serotonergic synapse
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09150 Organismal Systems
09156 Nervous system
04726 Serotonergic synapse
125365908 (Slc6a4)
04721 Synaptic vesicle cycle
125365908 (Slc6a4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
plop02000
]
125365908 (Slc6a4)
Transporters [BR:
plop02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
125365908 (Slc6a4)
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Gene cluster
GFIT
Motif
Pfam:
SNF
5HT_transport_N
Motif
Other DBs
NCBI-GeneID:
125365908
NCBI-ProteinID:
XP_048222167
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Position
17:18297202..18323615
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AA seq
630 aa
AA seq
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METTPLNSQKVLSACKDGEDCQENGVLQKGIPTPGDRAESSQISNGYSAVPSPSAGEDTR
HSIPAATTTLVAEVHQGERETWGKKMDFLLSVIGYAVDLGNIWRFPYICYQNGGGAFLLP
YTIMAIFGGIPLFYMELALGQYHRNGCISIWRKICPIFKGIGYAICIIAFYIASYYNTIM
AWALYYLISSFTDQLPWTSCKNSWNTGNCTNYFSEDNITWTLHSTSPAEEFYTRHVLQIH
RSKGLQDLGGISWQLALCIMLIFTIIYFSIWKGVKTSGKVVWVTATFPYIILSVLLVRGA
TLPGAWRGVVFYLKPNWQKLLETGVWVDAAAQIFFSLGPGFGVLLAFASYNKFNNNCYQD
ALVTSAVNCMTSFVSGFVIFTVLGYMAEMRNEDVSEVAKDAGPSLLFITYAEAIANMPAA
TFFAIIFFLMLITLGLDSTFAGLEGVITAVLDEFPHIWAKRREWFVLIVVITCFFGSLMT
LTFGGAYVVKLLEEYATGPAVLTVALIEAIAVSWFYGITQFCSDVKEMLGFSPGWFWRIC
WVAISPLFLLFIICSFLMSPPQLRLFQYSYPHWTVILGYCIGTSSVICVPTYITYRLITT
PGTVKERIIKSITPETPTEIPCGDIRLNAV
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggagaccacacccttgaattctcagaaggtgctgtcagcttgcaaggatggagaggat
tgtcaggaaaatggcgttctacagaaaggtatccccaccccaggggacagagccgagtcc
agccaaatatccaatggctactcagcagttcccagccctagtgcaggcgaagacactcgg
cactccatcccagctgccaccaccaccctagtggcagaggttcatcaaggagaacgggag
acctggggcaagaagatggatttcctcctctccgtcatcggctatgctgtggacctgggc
aacatctggcgctttccttacatatgttatcagaatggagggggggcattcctcctcccc
tacaccatcatggccattttcggggggatcccgctgttttacatggagctcgcactgggc
cagtaccaccgaaatggatgcatttctatatggaggaaaatctgcccgattttcaaagga
attggctatgccatctgcatcattgccttctacatcgcctcctactacaacaccatcatg
gcctgggcactctactacctcatctcctctttcaccgaccagctgccctggaccagctgc
aagaactcctggaacactggcaactgcaccaactacttctccgaggacaacatcacctgg
acactccattccacatcccctgctgaggaattctacacacgccatgtcctgcagatccac
cgctctaagggactccaggacctaggaggcatcagctggcagctggccctctgcatcatg
ctcatcttcaccattatctacttcagcatctggaaaggggtcaaaacatctggcaaggtg
gtgtgggtgacagccaccttcccttacatcattctttctgtccttctggtgagaggggcc
acccttcctggagcttggaggggtgttgtcttctacttgaaacccaactggcagaagctc
ctagagacaggggtgtgggtagacgctgctgctcagatcttcttctctcttgggccaggc
tttggggtcctcctggcttttgctagctacaacaagttcaacaacaactgttaccaagat
gccctggtgaccagcgcggtaaactgcatgaccagcttcgtttctggatttgtcatcttc
acggtgctcggatatatggctgagatgaggaatgaagatgtatctgaggtggccaaagat
gcaggtcccagcctcctcttcatcacatatgcagaggccatagccaacatgccagcagct
acattctttgccatcatcttcttcctaatgttgatcacactgggcttggacagcacgttt
gcaggcttggagggggtgatcacagctgtgctggatgagtttccacatatctgggccaag
cgccgggagtggtttgtactcattgtggtcataacgtgcttctttggatccctgatgacc
ttgacttttggaggggcctacgtggtgaagctgctggaggagtatgccacagggcctgcc
gtgctcactgttgcgcttatagaagccatcgctgtgtcctggttctatggcatcactcag
ttctgcagtgatgtgaaggagatgcttggcttcagtcctggatggttctggaggatctgc
tgggtagccatcagccctctttttctcctgttcatcatttgcagttttttgatgagccca
cctcagctacggcttttccagtatagttatcctcactggactgtcatcctgggttactgc
ataggaacctcatctgttatctgtgtccccacatacataacgtaccggctgatcaccact
ccagggacggttaaggagcgcattattaaaagtattactccagaaacaccaacagaaatt
ccctgtggggacatccgattgaatgctgtgtaa
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