Perognathus longimembris pacificus (Pacific pocket mouse): 125367829
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Entry
125367829 CDS
T08928
Symbol
Cdk7
Name
(RefSeq) cyclin-dependent kinase 7 isoform X1
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03022
Basal transcription factors
plop03420
Nucleotide excision repair
plop04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
125367829 (Cdk7)
09124 Replication and repair
03420 Nucleotide excision repair
125367829 (Cdk7)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
125367829 (Cdk7)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
plop01001
]
125367829 (Cdk7)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plop03021
]
125367829 (Cdk7)
03019 Messenger RNA biogenesis [BR:
plop03019
]
125367829 (Cdk7)
03400 DNA repair and recombination proteins [BR:
plop03400
]
125367829 (Cdk7)
Enzymes [BR:
plop01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
125367829 (Cdk7)
2.7.11.23 [RNA-polymerase]-subunit kinase
125367829 (Cdk7)
Protein kinases [BR:
plop01001
]
Serine/threonine kinases: CMGC group
CDK family
125367829 (Cdk7)
Transcription machinery [BR:
plop03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
125367829 (Cdk7)
Messenger RNA biogenesis [BR:
plop03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
125367829 (Cdk7)
DNA repair and recombination proteins [BR:
plop03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
125367829 (Cdk7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
Seadorna_VP7
Kinase-like
ABC1
Haspin_kinase
APH
FTA2
Pkinase_fungal
Motif
Other DBs
NCBI-GeneID:
125367829
NCBI-ProteinID:
XP_048224505
LinkDB
All DBs
Position
19:complement(44202366..44219282)
Genome browser
AA seq
346 aa
AA seq
DB search
MALDVKSRAKRYEKLDFLGEGQFATVYKARDKNTNRIVAIKKIKLGHRSEAKDGINRTAL
REIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYVLM
TLQGLEYLHQQWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRA
PELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDM
CSLPDYVTFKSFPGIPLQHIFSAAGDDLLELIQGLFLFNPCTRITASQALKMKYFSNRPG
PSPGCQLPRPNCPAEALKEQSNPAMATKRKRTEGLEQGGLPKKLIF
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggctctggacgtgaagtctcgagcgaagcgctatgagaagctggacttcctcggggag
ggccagttcgccacggtctacaaagccagagataagaacaccaaccgcatcgtcgccatc
aagaagatcaaacttggacacagatcagaagctaaagatggcataaacagaacagctcta
agagagataaaattattacaggagctcagtcatccgaatataattggtctccttgatgct
tttgggcataaatctaatattagccttgtctttgactttatggaaactgatttagaggtt
ataataaaggataatagtcttgtgctgacaccctcccacattaaagcgtacgtgctaatg
actcttcaagggctggaatatttacatcagcagtggatcctccatagggatctaaagcca
aacaacttgttgctagatgaaaatggagtactaaaactggcagactttggcctggccaag
tcatttggaagccctaatagagcatatacacatcaggttgtaaccaggtggtatcgggcc
cccgagttgctctttggggctaggatgtatggtgtgggcgtggacatgtgggctgtgggc
tgcatattagcagagctgcttctgagggttccttttttgccaggggactcagatcttgat
cagctaacaagaatatttgaaactttgggcacaccgacagaggagcagtggcctgatatg
tgcagtcttcctgactatgtgacatttaagagtttccctgggatcccattacaacacatc
ttcagtgccgcaggagatgatttgcttgaactaatacaaggcctgttcttatttaatcct
tgcactcgaattacagcctcacaggcattgaaaatgaagtactttagtaaccggccaggt
ccaagccccgggtgtcagctgcccagacccaactgtcccgcggaggcactaaaggagcag
tccaatcccgccatggcaacaaaacggaaacgaacggagggcttggagcaaggaggattg
cctaagaagctaattttttag
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