Pseudomonas lundensis: AA042_11640
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Entry
AA042_11640 CDS
T05473
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
plq
Pseudomonas lundensis
Pathway
plq00730
Thiamine metabolism
plq01100
Metabolic pathways
plq01240
Biosynthesis of cofactors
plq04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
plq00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
AA042_11640
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
AA042_11640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
plq03016
]
AA042_11640
Enzymes [BR:
plq01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
AA042_11640
Transfer RNA biogenesis [BR:
plq03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
AA042_11640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
QueC
Rhodanese
tRNA_Me_trans
Motif
Other DBs
NCBI-ProteinID:
AOZ13230
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All DBs
Position
2557476..2558930
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AA seq
484 aa
AA seq
DB search
MKLIVKVFPEITIKSRPVRMRFVRQLAKNIRTVLRDLDPAVVVSGVWDNIELQTRVSDPK
ALKEMTERLSCMPGIAHFLQVDEYPLGDFDDIVEKCKLHFGDSLAGKVFSVRCKRAGKHP
FSSMDVEKYVGSKLRRECGAAGISLKNPEIEVRIEIRDQRLFVIHNQHDSIGGYPLGALE
QTLVLMSGGFDSTVAAYQIMRRGLMSHFCFFNLGGRAHELGVMEVAHYIWKKYGSSQRVL
FVSVPFEEVLGEILGKVDNSHMGVILKRMMLRAASRIADRLDIDALVTGEAISQVSSQTL
PNLSVIDCVTDKLVLRPLIASHKQDIIDLATEIGTADFAKHMPEYCGVISVNPKTHAKRP
RVEYEEQQFDMAVLERALERAKLVPIDRVIDELGQDLQVEEVSEVLAGQIVLDIRHPDAQ
EDQPLELAGIEVQALPFYALNSRFKELDDTRQYLLYCDKGVMSRLHAHHLLSEGHANVRV
YRPS
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaaactaatcgttaaagtcttccccgagatcactatcaagagccgcccggttcggatg
cgttttgtccgtcaattggccaaaaacatccgtaccgtgctccgcgatctggacccggct
gtggtagtgagcggtgtgtgggacaacatcgagctgcaaacgcgtgtgagcgaccccaaa
gccctgaaagagatgaccgaacgcctgagctgcatgccgggcatcgcgcattttctgcag
gtggatgagtacccgttgggcgacttcgacgacatcgtcgagaagtgcaaactgcacttc
ggcgattcgctggccggcaaggtcttttcggtgcgctgcaagcgtgcgggcaagcacccg
ttttcctcgatggacgtcgagaaatatgtgggcagcaagctgcgtcgtgagtgcggtgcg
gccggaatctcgctgaaaaacccggaaatcgaagtccggatcgaaattcgcgaccaacgg
ttgtttgtgattcacaaccagcacgacagtattggcggctacccgctgggcgcgctggaa
cagacgctggtgctgatgtccggtggtttcgactccaccgtcgcggcctaccagatcatg
cgccgcggcctgatgagccatttttgcttcttcaacctcggcggtcgtgcccatgaactg
ggcgtgatggaagtcgcgcactatatatggaagaagtacggcagctcgcagcgggtgctg
tttgtcagcgtgccgttcgaagaagtgctgggcgaaattctcggcaaagtcgataacagt
catatgggcgtcattttgaagcgtatgatgttgcgcgctgcgtcccgtattgcggaccgg
ctcgatatcgacgcactggtgacgggcgaagcgatctctcaggtgtccagccagacgctg
cccaacctgtccgtgatcgactgcgtgaccgacaaactggtcttgcgcccgctgatcgcc
agccacaagcaggacatcatcgatttggcgactgagatcggcactgccgacttcgccaaa
cacatgcctgaatattgcggggtgatttcggtcaaccccaagacccacgccaaacgtccg
cgcgtggagtacgaagaacaacagtttgatatggccgtgcttgagcgtgcgcttgagcgg
gccaaactggtgccgattgatcgcgtcatcgatgaattgggccaggacttgcaagtcgaa
gaggtcagcgaagtgctggcgggccagatcgtcctcgacatccgtcacccggatgcccag
gaagatcagccgctggaactggctggcatcgaagtacaagcgttgccgttctatgctctg
aacagccgcttcaaggaactggatgacacccgtcagtacctgttgtattgcgacaaaggc
gtgatgagtcgcctgcatgctcaccatttgctcagtgagggacatgccaatgtgcgcgtt
tatcgaccgagctaa
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