Planctomyces sp. SH-PL14: VT03_05975
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Entry
VT03_05975 CDS
T04354
Symbol
dcm
Name
(GenBank) DNA-cytosine methyltransferase
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
pls
Planctomyces sp. SH-PL14
Pathway
pls00270
Cysteine and methionine metabolism
pls01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pls00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
VT03_05975 (dcm)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pls03000
]
VT03_05975 (dcm)
03032 DNA replication proteins [BR:
pls03032
]
VT03_05975 (dcm)
03036 Chromosome and associated proteins [BR:
pls03036
]
VT03_05975 (dcm)
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
pls02048
]
VT03_05975 (dcm)
Enzymes [BR:
pls01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
VT03_05975 (dcm)
Transcription factors [BR:
pls03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
VT03_05975 (dcm)
DNA replication proteins [BR:
pls03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
VT03_05975 (dcm)
Chromosome and associated proteins [BR:
pls03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
VT03_05975 (dcm)
Prokaryotic defense system [BR:
pls02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
VT03_05975 (dcm)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
HTH_31
HTH_3
HTH_19
Motif
Other DBs
NCBI-ProteinID:
AMV17419
UniProt:
A0A142WRH4
LinkDB
All DBs
Position
1490616..1491875
Genome browser
AA seq
419 aa
AA seq
DB search
MTQVTEFSKLQQQSGLSLDLLAESLGYSTRQLRRFESGISTPRPPVIEAMRRLISKNEPP
QREAFRFIDLFAGIGGLRRGFDGLGGKCVFTSEWNPYAKQTYCANFHDGDDHVFHGDITT
IDAKDVPDHDVLVAGFPCQPFSIAGVSKKNALGREHGFKCEAQGTLFFDVARIIEHHRPK
AFLLENVKNLVNHDKGKTFSVIHRTLKEELGYNVHWKVINAKSFVPQNRERIFIVGFREE
NDFSFDDIVLPDPLKGPKLSQILHPEDGTESPEGHYTTGPKAMVCDRYTLTDHLWKYLQD
YAEKHRLKGNGFGFGLNGPEDVARTLSARYYKDGSEILIKQKGKNPRRLTPRECARLMGF
DKPGQSDFKIPVSDMQAYKQFGNAVVVAAVEAVARHMAPWIEGSNGMLPSGQRLLTFHA
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgacacaggttactgaattttcaaagctgcagcagcaatccggtctctcgctcgaccta
cttgcggaatcccttggctactccacccgccagctgcggcgctttgaaagcgggatttcg
actccgcggccaccggtgatcgaggcaatgcggcgcctcatctcgaaaaatgagcctcct
cagcgggaagcgtttcggttcatcgacctgtttgcgggcatcggcgggcttcgtcgcggg
ttcgacgggctcggcggcaaatgcgttttcaccagcgagtggaacccatacgcaaagcag
acctattgcgccaacttccacgacggcgatgaccacgtgtttcatggcgacataaccacg
atcgacgcgaaggacgttcccgatcacgacgtactcgtggcagggttcccctgccagccg
ttttcgatcgctggtgtaagcaagaaaaacgcacttggacgggaacatggcttcaaatgc
gaagcccagggaacgctgtttttcgacgttgcacgaattattgaacatcacaggccgaag
gcattcctgctggagaacgtcaagaatctggtgaaccatgacaagggaaagacgttctcc
gttatccaccgaacgcttaaggaagagctcggctacaacgttcactggaaggtcatcaac
gcgaaatcgttcgtcccgcaaaatcgcgaacgaatcttcattgtcggcttcagggaagag
aacgatttttcgtttgacgacatagtgctgcccgacccgctgaaagggccaaagctcagc
cagatcctgcacccagaggacgggaccgaatcacccgaggggcactataccaccgggcca
aaggcgatggtttgcgaccgttacacgcttacagatcatttgtggaagtaccttcaggat
tatgctgaaaagcatcggcttaagggcaatggctttggattcggattgaacggtccagaa
gacgtggccaggacgctgtccgcgaggtattacaaggacggttcagaaatcctgatcaag
cagaagggaaagaatccgcgacgactcactccgcgggaatgtgccagactgatgggattt
gacaagccgggacagtcagacttcaaaatccctgtctcggatatgcaggcatacaaacaa
ttcggcaacgctgttgtagttgcagccgtcgaagccgttgcccgccatatggccccgtgg
atagagggcagcaatggaatgttgccctccggtcagaggttgctcaccttccatgcctga
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